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PLM1_5_coex_redo_sep16_scaffold_63_13

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(11603..12610)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor Tax=Amycolatopsis balhimycina RepID=UPI00036CEBC1 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 331.0
  • Bit_score: 521
  • Evalue 5.50e-145
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CDX19621.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 334.0
  • Bit_score: 521
  • Evalue 7.70e-145
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 335.0
  • Bit_score: 520
  • Evalue 2.60e-145

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
GTGACAGCCGACCTGATCTCAAGGGCGCGGGCTGGGGACGGCGAGGCGTTCCGAGCGCTGACCGAGCCGCACCGCCGAGAGCTACAGGTGCACTGCTATCGGATGCTTGGATCCTTCCAGGACGCCGAGGATACCCTCCAGGACACGCTGGTGGCCGCCTGGCAGGGCCTGGGAGGGTTCGAGGGCCGTGCGTCGATCCGCACCTGGCTCTACCGGATCGCCACGAACCGGTGCCTCAACGCGCTTCGCTCAGCCAGCCGATGCCCCGCCAAGGAGTGGGACGTGCCCGAAGTTAACCCGCCCGAGCCGACCCGGCTCGGCGAAGTCGTGTGGCTCGAGCCATTTCCCGACGCCCTCCTCGAGGGGGCGATCGACGTGCCGCTCGGCCCCGAGGCCCGCTACGAGCAGAGCGAAGCCATCTCCTTGGCCTTCGTGACCGCTCTTCAGGTCCTGCCACCTCGCCAGCTCGCCGTCGTCATCTTGCGCGACGTGCTCGGATTCCGCGCGAACGAGGTCGCTGACATGCTGGACTCGACCGTCGAATCGGTCAACAGCGCCCTCAAACGTGCGCGCGCCAGCCTGCAGCGCCGACGGTCGCCGATCGCAGAGTACGGGCCGCCTCCCGCCCCGGACTCACCCTCCGAGGATGCGATCGTGGCGAAGTTCGTCCGCGCGTACGAGTCCGCCGATCTCGATGCGCTGGTGGCCCTGCTGACAGACGATGTCTTCAGCTCCATGCCACCGATTCCCCTCGAATACCAAGGCCGCGACGTCGTGGCCCGCCTGTGCGCCAGCATCTTCGGCTCGGGCCGAAGGTTTGACCTCGTCCCGACGCGAGCCAACGGTCAGCCGGCGTTCGGGGCCTACCTGCGCGGCCCTACCGGCATCAGCCACGGGACCGGCCTCCTCGTCCTCACTCTCACCGGCGACCGGATCTCCGGCATGACCCGCTTCGACAACAGCGTGCTCCCATGGTTCGGGCTACCGCGATCGCTCCCAAGCCGGTAG
PROTEIN sequence
Length: 336
VTADLISRARAGDGEAFRALTEPHRRELQVHCYRMLGSFQDAEDTLQDTLVAAWQGLGGFEGRASIRTWLYRIATNRCLNALRSASRCPAKEWDVPEVNPPEPTRLGEVVWLEPFPDALLEGAIDVPLGPEARYEQSEAISLAFVTALQVLPPRQLAVVILRDVLGFRANEVADMLDSTVESVNSALKRARASLQRRRSPIAEYGPPPAPDSPSEDAIVAKFVRAYESADLDALVALLTDDVFSSMPPIPLEYQGRDVVARLCASIFGSGRRFDLVPTRANGQPAFGAYLRGPTGISHGTGLLVLTLTGDRISGMTRFDNSVLPWFGLPRSLPSR*