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PLM1_5_coex_redo_sep16_scaffold_25_31

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(31365..31706)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family Tax=Frankia sp. EUN1f RepID=D3D1X6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 86.0
  • Bit_score: 57
  • Evalue 9.90e-06
TetR family transcriptional regulator {ECO:0000313|EMBL:ETK33396.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 83.0
  • Bit_score: 58
  • Evalue 4.80e-06
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 33.0
  • Bit_score: 53
  • Evalue 4.00e-05

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
TTGCACGAGCAACGTCGTCAGGACTGGCAGCATCAGGCCGCCGCCAATGCCCTGCATGACGCGGCCAGCGACCAGGCTCGGCGCGTTCCAGGCAAGGCTCGCACCGATCGAGCCCACCAGAACAATGCCAGGGCGGCCATCCAGATGCGCTTGCCGCCGAGCCGGTCGATGAGCCAGACGAGATCGACGAGGAGCGCCTTACACCGCGGATCGCGACCGTGGGCGCGGGACTTGCTGCGCCACGAGATGTTGATGACCCTGCGGCCGGTGCCGGAAGAGACGATCGCAGAGATCGTGGACGATATCTTTCTGCCGCTGGTACGCCGGACTAGCGAAGCGTAG
PROTEIN sequence
Length: 114
LHEQRRQDWQHQAAANALHDAASDQARRVPGKARTDRAHQNNARAAIQMRLPPSRSMSQTRSTRSALHRGSRPWARDLLRHEMLMTLRPVPEETIAEIVDDIFLPLVRRTSEA*