ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_25_44

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(46450..46818)

Top 3 Functional Annotations

Value Algorithm Source
R.ruber ORF1, phbCRr, ORF3 and ORF4 Tax=Nocardiaceae RepID=Q53048_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 120.0
  • Bit_score: 139
  • Evalue 1.60e-30
XRE family transcriptional regulator {ECO:0000313|EMBL:EME65747.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 121.0
  • Bit_score: 139
  • Evalue 2.30e-30
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 120.0
  • Bit_score: 132
  • Evalue 5.70e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus ruber → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGAGCACGCAGCAGTCGGCGGATGATCAGCTGCGACTCGGCGAGATCATCCGCCGGCAACGAGAGCTGGGCGAGCTGTCCATGCGACAGGTCGCAGCGATGGCCGGCATCTCCAATCCGTACCTCTCCCAGATTGAACGTGGGCTTCGAGCCCCTTCTGAGGAGGTCCTCCGGGCGATCGCCGACTCCCTGCACGTCTCTGCCGACCTGCTTCGTGGCGAGGAGCCCGCAGCGTCATCGACTGAGGTCATCGAGGCGATTCAGTCTGATTCGGACTTGACCGCGTCCCAGCGGCGTTCCCTGATCGAGGCGTACGAGGCGCTCCGTCAGGTCACGATCGGACGGCGCAGGGGACGGGCGGCTCGATGA
PROTEIN sequence
Length: 123
VSTQQSADDQLRLGEIIRRQRELGELSMRQVAAMAGISNPYLSQIERGLRAPSEEVLRAIADSLHVSADLLRGEEPAASSTEVIEAIQSDSDLTASQRRSLIEAYEALRQVTIGRRRGRAAR*