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PLM1_5_coex_redo_sep16_scaffold_108_5

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(3772..4815)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Rhodococcus opacus RepID=UPI00029CC78F similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 334.0
  • Bit_score: 408
  • Evalue 5.40e-111
AraC family transcriptional regulator {ECO:0000313|EMBL:AII07911.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 320.0
  • Bit_score: 399
  • Evalue 3.50e-108
HTH-type transcriptional activator rhaS similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 318.0
  • Bit_score: 396
  • Evalue 7.80e-108

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGTCCCTAACGTACGTATCCAAACGACTGATTGGTAGTGGCGGACCCGCCACGTTGAGTATCGTTTCCGACGTGGACGTTGCAGTTCTCGCAGTGGACGGTTGCTTCGACTCGGGGCTCTCAGCAGTAGTCGATGTGCTTGCGACGGCGAACGCCCTCCGTGAGAACGTGCCGGCATCGCCAACCGCATTCACGGTGACGATCGTGGGACTCAAGAAGCAGGTCCGCACTGGCAACGGCTTGACAGTGAATCCCGTCCCTGCCAAGAAGATGCCGCAGTTTCCCGATTTGTTGATCATGCCCGCCCTGGGGGTGAAAACTCCCGATGCGATCATCGACACCGTCCGTGGGCACGCGGCCCTCGACCTCATCCGGGAGAGCCACGCGAACGGCACGGAGTTGGCTGGTGCCTGCACGGGAACGTTCTTCTTGGCCGAGTCTGGAGTCCTTGACGGCAGGTTGGCAACGACCAGCTGGTGGCTCGGTCCTGCGTTTCGGAGTCACTATCCCGCAGTGATCTTGGACGAGACCCGGATCATCGCGCGGGATGCTCGGATCACGACCGCCGGCGCCGCGTTCGCCCACATTGATCTTGCACTATCGATCGTGCAGCAGCACAGCCCGAGCTTGGCGGACCTCACGGCGCGGTATCTGCTCATCGGCGACCGTCCGTCGCAGGCGGCGTTCGCAATGCCCGCGTTACTCGCCCGGGCAGACCCCACTATGGCGGCGTTCGAAGGATGGGTTCGGCAGCGACTTTCCCAGCCGTTGCGGATCTCTGACGCCGCGCGCGACCTCGGTATCAGCGAACGTACGCTGCAGCGTACGACCGCCTCTGTCGTCGGCATGTCGCCGCTGCACTTCATTCATCAGGTACGCCTCGACGAGGCCACTTTTTTGATGCGCGACACGGCAATGTCGACGAGCGCCATCGCGGCCGCGGTCGGCTATCGCGACGCCGGAACGCTCCGGGCACTCGTTCGCAAGCGGCGTAACAGCACGCTCAGATCGTTGCGGGCGGGACGACCGCCAGGCGGCCTCTAA
PROTEIN sequence
Length: 348
MSLTYVSKRLIGSGGPATLSIVSDVDVAVLAVDGCFDSGLSAVVDVLATANALRENVPASPTAFTVTIVGLKKQVRTGNGLTVNPVPAKKMPQFPDLLIMPALGVKTPDAIIDTVRGHAALDLIRESHANGTELAGACTGTFFLAESGVLDGRLATTSWWLGPAFRSHYPAVILDETRIIARDARITTAGAAFAHIDLALSIVQQHSPSLADLTARYLLIGDRPSQAAFAMPALLARADPTMAAFEGWVRQRLSQPLRISDAARDLGISERTLQRTTASVVGMSPLHFIHQVRLDEATFLMRDTAMSTSAIAAAVGYRDAGTLRALVRKRRNSTLRSLRAGRPPGGL*