ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_125_13

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 14511..15371

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H7N6_STRPR similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 283.0
  • Bit_score: 252
  • Evalue 4.10e-64
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EDY62847.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 283.0
  • Bit_score: 252
  • Evalue 5.70e-64
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 287.0
  • Bit_score: 244
  • Evalue 3.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces pristinaespiralis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGGCATCCGAGGAGGTCTTCGAGGAGCTGCGGCCCAGGCTGACCAGAGCTTCCTACCAGATTTTGGGGTCTTGGGCGGAGGCCGAGGACATCGTGCAGACCACATGGCTCAAGTGGCGACGCCATCACGACTCCGTCGAGTCGCCACGCGCGTGGCTCACAACGGTGGCGATGCGTGCGTCGATCGACGGGCTGCGAGCGCGTCAGGCCCGCCGGGAGGAGTACCCCGGCGAGTGGCTTCCGGAGCCGGTGAGCACGGAGCCAGGGCCTGAGGACATCGTCACTGATCGCAGCGCGCTGTCGCTGGGCGTCTTGGTGATGATGGAGTCTCTCTCGCCGCTCGAGCGGGCGGTGTTCGTGTTGCGTCGAGGGTTCAACTGGCCGTACGAGGAGATCGCGGAGATCCTCGACCGCTCACCCGAAGCGGTCCGGCAGCTCGATCATCGGGCACGACAGCAGCTGCGCGAGCGACCCGAGCGGTTCGAGCCGGACCCCGAGCGAGTGCAGGCAGCGACGGAGCGGTTCCTTGCTGCCTGTGTTGGCGGCAGCTTCGAGGCCCTGATGGAAGTCTTGGCACCCGACGTCGTGCTGCACAGCGACGCGGGTGGCGAGGCGAAGGCACCGCCGCGGCAGATCGCCGGCGCGGACAAGGTCGGGCGGTTCTTCATCGCGATGGCGCAGACGGCTCTGGCCGAGAGCGAGGTCTATGTGGTCGACATCAATGGGCTGCCTGGGCTGATCACTCTCAGCCACGGTCAGCTGGTGTCGGCACTGGCGTTCGACCTGGAGGGAGACCGGATCACCGATCTGTACCTGATGGCCGCACCATCCAAGCTCGGCGCGGTACGACGCGCGAGCTGA
PROTEIN sequence
Length: 287
MASEEVFEELRPRLTRASYQILGSWAEAEDIVQTTWLKWRRHHDSVESPRAWLTTVAMRASIDGLRARQARREEYPGEWLPEPVSTEPGPEDIVTDRSALSLGVLVMMESLSPLERAVFVLRRGFNWPYEEIAEILDRSPEAVRQLDHRARQQLRERPERFEPDPERVQAATERFLAACVGGSFEALMEVLAPDVVLHSDAGGEAKAPPRQIAGADKVGRFFIAMAQTALAESEVYVVDINGLPGLITLSHGQLVSALAFDLEGDRITDLYLMAAPSKLGAVRRAS*