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PLM1_5_coex_redo_sep16_scaffold_13472_2

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(132..1406)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F713_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 415.0
  • Bit_score: 508
  • Evalue 6.10e-141
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 417.0
  • Bit_score: 526
  • Evalue 2.30e-146
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 415.0
  • Bit_score: 508
  • Evalue 1.70e-141

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
GTGACTCGTGATCTGATCGAATGCGTGACCGATCCGACCACACAGGAGGCTATCGAGGCGGTCTGGCGTCTGGAGTCGACGAGGCTGATCGCCGGACTGGTCCGGATCGTACGAGACGTCGGGCTGGCCGAGGACCTCGCGCAGGATGCCCTGGTCGCTGCATTGACGCAGTGGCCCAGTACCGGCGTCCCGGACAAGCCCGGCGCGTGGATGATGACGATCGCCAAGCGTCGGGCAGTGGACCAGTTCCGGCGGCGCGACCGCCGTGATCAGCTCTACGCCGCTATCGCTCATGGGCAAGGAAGCGATGTGTCTGAGGAAGACTTCCTCGCCGCGGTCGACCACGTGGAAGACGACGTGCTGCGGCTGATGTTCGTCTGCTGCCACCCGGTCCTGACGCCGGAGGCACAGTGCACGCTGACACTGAAGCTGGTTGCCGGGTTGACCACCCGCGAGATCGCGCGAGCGTATCTGACGACGGAGGCGACCGTCGCACAACGGGTCGTTCGAGCCAAGCGGACCCTCACCGACGCCGGCGCGGCTTTGGAGGAGCCGAGCGAGGCCGAGCGCGCCGAGCGGCTGACCACCGTGCTCAGCGTGATCTACCTGCTCTACAACGAGGGATATTCAGCCACCGCCGGCAGCGAGTGGATGCGACCAACGCTCTGTGACGAGGCGCTCCGACTCGGGCGAATCCTCGCCGCGCTGGCTCCTCGAGAGAGCGAGGGGCATGGCCTGTCGGCGCTCATGGAGCTCCAGTCCTCTCGGCTGGCGGCGCGCATCGCCGAGGACGGGTCGCCGATCTTGTTACGTGATCAGGACCGCTTGCGGTGGGATCCAGTGCACATCATGCGAGGGCTGGCCGCGCTGGAACGGGCGGAGGCGAGCACGACCGAACTGGGCCCGTACGCTCTCCAGGCTGCGATCGCAGCGTGCCACGCCCGGGCCCAGACAGCGGAGGCCACCGACTGGGTACGCATAGCCGAGCTATACGAGCAGTTGGCTCGGCTCACCGGCTCGCCCGTGGTGGAGGTGAACCGCGCGGTCGCACTCGGCATGGCGTACGGACCGGAGGCCGGGCTGGCCTTGCTTGATCAGCTGGAAGGGCTACCGGCACTGAGTGGCTATCACCTGATGCCCAGCGTGCGGGGTGACTTGTTGGACAAGCTCGGGCGGCGGGAGGAGGCCCGGGCGGAGTTCGCACGGGCGGCGAGGATGACCCAGAACGAACGGGAACGCGCGTTGCTGTTGGAGCGCGCGAGCGGGAGGTCCTAA
PROTEIN sequence
Length: 425
VTRDLIECVTDPTTQEAIEAVWRLESTRLIAGLVRIVRDVGLAEDLAQDALVAALTQWPSTGVPDKPGAWMMTIAKRRAVDQFRRRDRRDQLYAAIAHGQGSDVSEEDFLAAVDHVEDDVLRLMFVCCHPVLTPEAQCTLTLKLVAGLTTREIARAYLTTEATVAQRVVRAKRTLTDAGAALEEPSEAERAERLTTVLSVIYLLYNEGYSATAGSEWMRPTLCDEALRLGRILAALAPRESEGHGLSALMELQSSRLAARIAEDGSPILLRDQDRLRWDPVHIMRGLAALERAEASTTELGPYALQAAIAACHARAQTAEATDWVRIAELYEQLARLTGSPVVEVNRAVALGMAYGPEAGLALLDQLEGLPALSGYHLMPSVRGDLLDKLGRREEARAEFARAARMTQNERERALLLERASGRS*