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PLM1_60_b1_redo_sep16_scaffold_41_83

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: 62160..62756

Top 3 Functional Annotations

Value Algorithm Source
RNase HII (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 194.0
  • Bit_score: 191
  • Evalue 1.30e-46
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 194.0
  • Bit_score: 191
  • Evalue 6.30e-46
Ribonuclease HII Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG37_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 194.0
  • Bit_score: 184
  • Evalue 5.50e-44

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Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 597
TTGCTAGGGCCGATTATCGTAGCAGGTGTTTGTGTTACCAAAAAATCAATTCCAGAAATGGTTGAAAAAGGAATTAAAGATTCAAAATTACTTAGCCCAAAAAAAAGGCAGGTTCTTTTTGGTCATGTCGTTAGTGTTGCGGAATCAATTTGTGTTTGTAGAATAAACATTGAAGACATTGATTTTCACGTTTTTAGAAATAATCTAAACCTTCTAGAAGCAGAAGCTATGGCAATTACAATTAGAAATATGAAATCGGACAAGACCTATGTAGATTCATGCGATGTAAATCCATCCAGATATCAAAGAACCATTAAAAGTTTTCTTAAACAAAATAATACAAAATTGGTCTCAATGCATCATGCGGATAGACTGAGTGTTGTAGTATCTGGCGCTTCCATTATCGCAAAGGTAATACGTGATTCTGAAATAAGTAAAATTCGCATCAAATATGGCGATGTAGGAAGTGGATATCCTTCTGATAAAAAAACAATAAAATTTGTAAAAGAATGGTTTAGACAAAAAAATCAAATTCCACCTTTTGCAAGAAAATCATGGAAACCTGCCCAAATGATTGTTTCATGTAATACTCTTTAG
PROTEIN sequence
Length: 199
LLGPIIVAGVCVTKKSIPEMVEKGIKDSKLLSPKKRQVLFGHVVSVAESICVCRINIEDIDFHVFRNNLNLLEAEAMAITIRNMKSDKTYVDSCDVNPSRYQRTIKSFLKQNNTKLVSMHHADRLSVVVSGASIIAKVIRDSEISKIRIKYGDVGSGYPSDKKTIKFVKEWFRQKNQIPPFARKSWKPAQMIVSCNTL*