ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_624_12

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: comp(10600..10950)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFT1_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 95.0
  • Bit_score: 133
  • Evalue 8.50e-29
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 111.0
  • Bit_score: 144
  • Evalue 1.80e-32
Putative transcriptional regulator {ECO:0000313|EMBL:AIF85570.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 111.0
  • Bit_score: 144
  • Evalue 8.90e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 351
TTGTTAGAATATAGTCTATATACTGAGCAGCTCCAACCTAAATTAGTGTCTAGTTCACAATCACATAGAGATAGAATTTACATAGTTCGAGACATAATCATGAAACTTGTTGAATATGGTCAGCTTAACCAGACAGCCTTGGTTAGTTTTTGTGGACTAAACTTAAAGAAGCATAGATCAATTTTTGACAAAATGGAGCTCAATGGGTTCATAATTAGGACAGAAAAAAGTTTAGGGAAAAGAACTGTAACGGTTTACAGTGCAACGCAAAAAGGATTAGAATTTTGCAGAACTATTATAGAACCCTACGAAAGTCTTTTTCCAAGATCTATTGACATTAATGGAAGTTAG
PROTEIN sequence
Length: 117
LLEYSLYTEQLQPKLVSSSQSHRDRIYIVRDIIMKLVEYGQLNQTALVSFCGLNLKKHRSIFDKMELNGFIIRTEKSLGKRTVTVYSATQKGLEFCRTIIEPYESLFPRSIDINGS*