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PLM1_60_b1_redo_sep16_scaffold_144

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_144_31
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30386..31180
DNA (795bp) protein (265aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Micromonospora RepID=D9T3R0_MICAI
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EWM68780.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
tRNA/rRNA methyltransferase
PLM1_60_b1_redo_sep16_scaffold_144_32
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31231..33189)
DNA (1959bp) protein (653aa)
Acyl-CoA dehydrogenase Tax=Streptomyces gancidicus BKS 13-15 RepID=M3B9M4_9ACTO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEG39691.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
acyl-CoA dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_144_33
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33402..34127
DNA (726bp) protein (242aa)
hypothetical protein bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_60_b1_redo_sep16_scaffold_144_34
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34167..34940)
DNA (774bp) protein (258aa)
RNA polymerase sigma factor Tax=Streptomyces sulphureus RepID=UPI0003663AAD
RNA polymerase sigma factor {ECO:0000313|EMBL:EST29360.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
PLM1_60_b1_redo_sep16_scaffold_144_35
Streptomyces sp. SPB74, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34993..35403)
DNA (411bp) protein (137aa)
Anti-sigma factor Tax=Streptomyces sp. SPB74 RepID=B5GD37_9ACTO
Anti-sigma factor {ECO:0000313|EMBL:EDY44233.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB74).;"
anti-sigma factor
PLM1_60_b1_redo_sep16_scaffold_144_36
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35547..36008)
DNA (462bp) protein (154aa)
Cyclase/dehydrase family protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JWX6_SACES
Cyclase/dehydrase family protein
Cyclase/dehydrase family protein {ECO:0000313|EMBL:CCH29917.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_144_37
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36107..37336
DNA (1230bp) protein (410aa)
glycosyl transferase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026259CA
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:AIJ22661.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_144_38
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37446..38684)
DNA (1239bp) protein (413aa)
Tetratricopeptide TPR_2 Tax=Frankia sp. (strain CcI3) RepID=Q2JFU0_FRASC
hypothetical protein
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABD09852.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_144_39
unknown

Not on your lists

38862..39032
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_144_40
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39119..39526
DNA (408bp) protein (136aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZQ9_ACTS5
Uncharacterized protein {ECO:0000313|EMBL:ETK37212.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_144_41
unknown

Not on your lists

39502..39726
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_144_42
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39723..40325
DNA (603bp) protein (201aa)
Putative amino acid permease Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA53_9ACTO
Integral membrane protein {ECO:0000313|EMBL:CEL14652.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
integral membrane protein
PLM1_60_b1_redo_sep16_scaffold_144_43
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40322..42400
DNA (2079bp) protein (693aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Transketolase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTY9_ACIC1
PLM1_60_b1_redo_sep16_scaffold_144_44
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42408..43388)
DNA (981bp) protein (327aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000368EBAD
Ku protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_144_45
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43449..44357
DNA (909bp) protein (303aa)
DNA polymerase LigD, polymerase domain Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V3W3_9PSEU
DNA polymerase LigD, polymerase domain {ECO:0000313|EMBL:EID54816.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
DNA polymerase LigD, polymerase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_144_46
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44478..44984
DNA (507bp) protein (169aa)
Putative dehydrogenase Tax=Frankia alni (strain ACN14a) RepID=Q0RPT1_FRAAA
Luciferase {ECO:0000313|EMBL:ETK31744.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_144_47
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44981..45583
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8RXM9_MICSL
Uncharacterized protein {ECO:0000313|EMBL:EWM67941.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_144_48
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45580..45864
DNA (285bp) protein (95aa)
phospholipid-binding protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026259BA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97983.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_144_49
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45861..46664
DNA (804bp) protein (268aa)
Putative phosphoesterase, ICC Tax=Saccharomonospora marina XMU15 RepID=H5X8R4_9PSEU
Putative phosphoesterase, ICC {ECO:0000313|EMBL:EHR51433.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
metallophosphoesterase
PLM1_60_b1_redo_sep16_scaffold_144_50
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46804..48330
DNA (1527bp) protein (509aa)
Magnesium or manganese-dependent protein phosphatase Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JWI4_STREN
prpI; magnesium or manganese-dependent protein phosphatase
Magnesium or manganese-dependent protein phosphatase {ECO:0000313|EMBL:AEW95765.1}; Putative magnesium or manganese-dependent protein phosphatase {ECO:0000313|EMBL:CCB76104.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_144_51
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48312..48731)
DNA (420bp) protein (140aa)
Anti-sigma factor antagonist Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W584_KINRD
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
PLM1_60_b1_redo_sep16_scaffold_144_52
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48897..49697)
DNA (801bp) protein (267aa)
membrane protein Tax=Streptomyces sp. CNT372 RepID=UPI00036B248F
Peptidase M50 {ECO:0000313|EMBL:EJJ04668.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
peptidase M50
PLM1_60_b1_redo_sep16_scaffold_144_53
unknown

Not on your lists

comp(49750..50706)
DNA (957bp) protein (319aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_144_54
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51046..52092
DNA (1047bp) protein (349aa)
Phage integrase family protein Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UZD7_9MICC
Phage integrase family protein {ECO:0000313|EMBL:EMY35751.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
phage integrase
PLM1_60_b1_redo_sep16_scaffold_144_55
unknown

Not on your lists

comp(52698..52931)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_144_56
unknown

Not on your lists

53528..53734
DNA (207bp) protein (69aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_144_57
unknown

Not on your lists

comp(54731..54874)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_144_58
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54890..55081)
DNA (192bp) protein (64aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035DB576
Regulator {ECO:0000313|EMBL:KHD79054.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_144_59
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55081..55827)
DNA (747bp) protein (249aa)
Putative transcriptional regulator, XRE family Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1X1_STRRD
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65320.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
XRE family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_144_60
unknown

Not on your lists

comp(56767..57021)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying items 31-60 of 60 in total

View Taxonomy