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PLM1_60_b1_redo_sep16_scaffold_175_30

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(27382..27876)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein Tax=Amycolatopsis nigrescens RepID=UPI00037C1060 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 161.0
  • Bit_score: 216
  • Evalue 1.40e-53
Membrane protein {ECO:0000313|EMBL:KDN19324.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 165.0
  • Bit_score: 215
  • Evalue 3.40e-53
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 165.0
  • Bit_score: 214
  • Evalue 2.00e-53

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGTCTGACCTGCTGCGGCCGTCCCGCCTGGATCAGCCTCGTCGCCACCGGCAGCGCCTGCCACACTTCGATGCCGACGTGTTCGGCCGCCTCTCCGAGCGCATCGCCCGTTTCCTCGGCACCGGCCGGTTCCTGCTGTTCCAGACGATCCTCGTAGCCGTCTGGATCACTCTGAACGTCTTCGCCGTCCGACTCCGCTGGGATCCTTACCCGTTCATCCTGCTCAACCTGGCGTTCTCCACCCAGGCCGCCTACGCGGCGCCGCTGATCCTGCTCGCGCAGAGCCGGCAGGCCGACCGCGACCGCGTCTCGCTCGAGGAGGACCGCCAGCGCGCGCAGGCCGCCAAGGCCGACACCGAGTATCTGGCCCGCGAACTGGCGGCGCTCCGGCACGCGATCGGCGAGGTCGCCACCCGTGAGTACGTGCGGTCAGAGCTGAATCGGCTCGTCGAGGAGATCCGCGCCAGCAAGGACGAGACGACCTTCCGCAGCTGA
PROTEIN sequence
Length: 165
MSDLLRPSRLDQPRRHRQRLPHFDADVFGRLSERIARFLGTGRFLLFQTILVAVWITLNVFAVRLRWDPYPFILLNLAFSTQAAYAAPLILLAQSRQADRDRVSLEEDRQRAQAAKADTEYLARELAALRHAIGEVATREYVRSELNRLVEEIRASKDETTFRS*