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PLM1_60_b1_redo_sep16_scaffold_301_27

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(30035..31897)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraC Tax=Salinispora arenicola RepID=UPI00036DBD1F similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 587.0
  • Bit_score: 827
  • Evalue 6.60e-237
type IV secretory pathway VirB4 protein-like protein similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 586.0
  • Bit_score: 819
  • Evalue 3.90e-235
Type IV secretory pathway VirB4 protein-like protein {ECO:0000313|EMBL:ADL49606.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 586.0
  • Bit_score: 819
  • Evalue 1.90e-234

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Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
ATGACCAACTCCACCGAACCGACGCCCACCACCGAGCAGACAACCGCCCCGAGCCGCCGCGCACGGCGCGCGGCCCGGCAGACCGCCCGTGCCGCCGCGAACCACGCCGCCGACGCCGTCACCGCCTCGATCGGGCCGGCCAGCATCGAAACCGCGCCCCGGCACGTCCGGGTCGGCGACGGCTACGCCGCGACGCTGATCGTCACCGGCTACCCCGCCGAAGTCGGCCCCGCCTGGCTCGAACCGCTCCTGGCCTGGCCCGGGCGCCTCGACGTCGCCCTGCACATCGAACCCCTCGCCCCGCAGGTCGCCGCCACCCGGCTCCGGCGGCAGCGGGCCCGCCTCGAGTCCAACCGGCGGGTCGACGCCGAACGCGGCCGGCTCGGTGACCCGAGCACCGACGCCGCAGCCGAAGACGCCGCCGACCTCGCCGACCGGGTCGCCCGCGGCATGGCGCGGCTGTTCCGCGTCGGCCTGTACCTCACCGTCCACGCCCAAACGCAGGCCGAGCTGGTCGAGGCGGTCGGCGAGGTCCGCGCCGCCGCCTCGGTGCTGCTGGACACCCAGCCCGCCACCTGGCGGCAACGCCAGGGCTGGACGTCCACCCTGCCGCTGGCCACCGACACCTTGCGGATGCGGCGGGTGATGGACACCGACGCGCTCGCCACCGCGTTCCCGCTCGCCTCCGCCGACCTGCCCGCGCCCCTGCCCGGTGAGGGCGTGCCAGTCGGCGGCGTGCTCTACGGGTTGAACACCGCCTCCGCCGGGGTGGTGTGGTGGGACCGCTGGGCGCAGGAGAACCACAACTCCGTCGTCGTCGCGCGTTCCGGTGCCGGCAAGTCCTACCTCGTCAAACTCGAAGTCCTGCGATCGTTGTATGCCGGGGTGCGGGTCGCAGTCATCGACCCCGAAGACGAATACCTGCGCCTCACCGAAGCCGTCGGCGGCACCGCGATCCAACTCGGCGCCCCCGGCATCCGGATCAACCCGTTCGACCTCCCGGCCGGGGACCGGCGCCCCGACGCGCTGACCCGCCGGGCGTTGTTCCTGCACACCCTCATCGCCGTGCTCCTGGGCCAGCAGCCGCCACCCGCCGAGCGCGCCGCGCTGGACCGGGCCATCCTCGCCACCTACGCCGCCGCCGGCATCACCAACGACCCCGCGACCTGGACTCGCTCGGCGCCGTTGCTGCGCGACCTCGCCGCCACCCTCGACAGTGAGACCAACCCGGCCGCGCGGACCCTGGCTGCCCGCCTGTCCCCCTGGGTCGACGGATCGTTCAAAGGCCTGTTCGACGGGCGCACCACCTACCGGCCGCGCGGTCACCTGGTGGTGTGGTCCACGCGGCAACTCGCCGACGAACTCCGAGCCGCCGGGATGCTCCTCGCCCTCGACGCGATCTGGCGCGACGTCGACACCCCCGCCAGCGGCCGTGCCGACGCGCACGGCGGAACACTCGGCGCCCGGCGCCTCGTCGTCGTCGACGAGGCATGGACCCTGCTCCGCGACGGCGAAGGCGCAAAATTCCTATACCGGCTCGCCAAGGCCGCCCGCAAACGCCGCGCCGGCCTCGCCGTCATCACCCAAGACGCCGCCGACCTCCTCGGCTCCGACCTCGGCCAGGCCGTCGTCTCCAACGCCGCCACCCAAATCCTGATGCGCCAAGCCCCCCAAGCCATCGACCAGATCGCCGACACCTTCGGCCTCACCGCCGGCGAAGCACGCATGCTGCTCGCCGCCGGACGAGGCGAGGCACTACTCCTCGCCGGATCTCACCGGGTGACGTTTCAGGCCGTCGCGTCGCCGCGGGAACACGAGTTATGTGCTGGACTCGCGGACCTCCTCGACGAGGAGGACCTCTGA
PROTEIN sequence
Length: 621
MTNSTEPTPTTEQTTAPSRRARRAARQTARAAANHAADAVTASIGPASIETAPRHVRVGDGYAATLIVTGYPAEVGPAWLEPLLAWPGRLDVALHIEPLAPQVAATRLRRQRARLESNRRVDAERGRLGDPSTDAAAEDAADLADRVARGMARLFRVGLYLTVHAQTQAELVEAVGEVRAAASVLLDTQPATWRQRQGWTSTLPLATDTLRMRRVMDTDALATAFPLASADLPAPLPGEGVPVGGVLYGLNTASAGVVWWDRWAQENHNSVVVARSGAGKSYLVKLEVLRSLYAGVRVAVIDPEDEYLRLTEAVGGTAIQLGAPGIRINPFDLPAGDRRPDALTRRALFLHTLIAVLLGQQPPPAERAALDRAILATYAAAGITNDPATWTRSAPLLRDLAATLDSETNPAARTLAARLSPWVDGSFKGLFDGRTTYRPRGHLVVWSTRQLADELRAAGMLLALDAIWRDVDTPASGRADAHGGTLGARRLVVVDEAWTLLRDGEGAKFLYRLAKAARKRRAGLAVITQDAADLLGSDLGQAVVSNAATQILMRQAPQAIDQIADTFGLTAGEARMLLAAGRGEALLLAGSHRVTFQAVASPREHELCAGLADLLDEEDL*