ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1677_6

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(3609..3932)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix HxlR type Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DQQ4_DESRL similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 93.0
  • Bit_score: 105
  • Evalue 3.00e-20
helix-turn-helix HxlR type similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 93.0
  • Bit_score: 105
  • Evalue 8.50e-21
Helix-turn-helix HxlR type {ECO:0000313|EMBL:AEG62051.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 93.0
  • Bit_score: 105
  • Evalue 4.20e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfotomaculum ruminis → Desulfotomaculum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 324
ATGGAAAGCGCCCATGTCACGCCGCGCCTCACCCCCGACGAGTGTCCCGTGACACAGACGCTGGCCTTCGTCGGCAGCAAGTGGACGCCGCTGGTGATCTTTCATCTGAACCTCGGCAGCAAACGCTACGGCGAGTTAGAGCGGGCGTTGCCGGGCATTAGCCCGAAGACACTCGCCGAGCGGCTCCAGACGCTCGAAGAGCAGGGTCTGGTCACTCGCACCGTCCACCCCGACAAGCCACCCCGCGTGGACTATGCCTTGACCGAGCGCGGTCGGACGCTGGGCGACATCCTGAACTCGATCGCCGAGTGGGCCACTTCCTGA
PROTEIN sequence
Length: 108
MESAHVTPRLTPDECPVTQTLAFVGSKWTPLVIFHLNLGSKRYGELERALPGISPKTLAERLQTLEEQGLVTRTVHPDKPPRVDYALTERGRTLGDILNSIAEWATS*