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PLM1_60_b1_redo_sep16_scaffold_4948_1

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 2..505

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 167.0
  • Bit_score: 292
  • Evalue 2.20e-76
DNA ligase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HUW5_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 167.0
  • Bit_score: 288
  • Evalue 2.30e-75
ligA; DNA ligase (NAD+) similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 167.0
  • Bit_score: 288
  • Evalue 8.40e-76

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATCCCGATGGCCTCCGAAGGCACGGCCGCACGGCTGTGCCGTGCGGGGTTCGGCTCACTCGAGCAGGTCGCCGACGCAGACGTCGAACGACTGGTGGCCGTGGAGGACATCGGGCCGAAGGTCGCCGCCTCGCTGATCGAGCACCTCACCCGGCTGCGACCCGAGCTGCAACGGCTGCGGCAACGCGGAGTTTCCCTGGACGTGCGTGAAGAGGACCTTCCGCCGGTCGTCGCGGCCGGCGCGCCGCTGGCCGGCAAGACGGTGGTGATCACCGGCGCGATCAGCGACCCGCGCTCGGGCGAGAAGGTCGCCCGCCCCACTTTCCAGCGGCTGTGCGAGAAGGCCGGCGCGACCACCGCGTCGTCGGTCTCGGCGAGCACCGACCTGCTCATCACCGGTGCTGGCGTCGGCGCGAGCAAACTCACCAAAGCCGAGAAACTCGGGGTCGAGGTCGTCGACCAGAGCGAAATCTGGCAACAGCTAATCGCAGCCGGCATCACCTAG
PROTEIN sequence
Length: 168
IPMASEGTAARLCRAGFGSLEQVADADVERLVAVEDIGPKVAASLIEHLTRLRPELQRLRQRGVSLDVREEDLPPVVAAGAPLAGKTVVITGAISDPRSGEKVARPTFQRLCEKAGATTASSVSASTDLLITGAGVGASKLTKAEKLGVEVVDQSEIWQQLIAAGIT*