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PLM1_60_b1_redo_sep16_scaffold_4948_5

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(2358..3350)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BC44_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 315.0
  • Bit_score: 427
  • Evalue 6.20e-117
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 315.0
  • Bit_score: 427
  • Evalue 1.80e-117
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ88067.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 315.0
  • Bit_score: 427
  • Evalue 8.70e-117

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCTGACCGGCGACGGCTCCCGGCTGGAGCCGTTCCGGACCGAGCTGACCGGCTACTGCTACCGGATGCTCGGCTCCGGTTTCGAGGCCGAGGACGCGGTGCAGGAAACGCTGGTGCGAGCCTGGCGGTCGTTCGACCGCTACGACGAGCAGCGGGCGTCGCTACGTACCTGGCTTTACAGCATCGCGAACAACATTTGCCTCGACATGCTGCGCAGCACACAACGCCGGGCCCGCGCTATGGATCTCGGCCCGGCGGCCAAGGCTGGGCAGGGCATCGGCGAGCCGGCGCCGGAGCGGACTTGGATCCAGCCGATTCCGGACAGCCTTGCGGTGCCGATGAACGGCAATCCGGAAGAGTTGGCCGTGCAGCGCGAGACGATCCGCCTGGCCTTCGTCGCCGCGCTGCAGTACCTGCCGCCCCGTCAGCGGGCTGTGCTGATCCTGCGCGACGTGTTGTGCTGGAGGGCCGCGGAAGTTGCGCGGCTTCTGGAAACCACCGTTGCGTCGGTGACCAGTGCATTGCAGCGGGCGAGGTCGACGCTCAACGCAGTCGAGCTCACGCCCGGCGAACCATTCCGGCCGTCCGACAGCGCCCAGCGCGAGCTACTCACCCGCTACTGCACCGCGTTCGAGCGCCACGACATCACCGCGCTCGTAGCTCTCCTCCATCACGACGCAACGATGTCGATGCCTCCCTTCATGTGGTGGCTTCGTGGCCATGACCACATCCGGCAGGCGCTGCTGGACCCAGACGCATCCTGCGAAGGCGCACGGCTCGTCCCGACCGCGGCGAACGGTTCGCCGGCGTTCTGGCAGATGCGGCCCGGCCCGGCCGGCAGCTACGTGCCGTTCGGGCTGGTCCTGCTCGACGTGTTCGAGGGTCTGATCACCGGTATCACCACTTACCTCGACGCCGACCGGCTGGTCCCGCTGTTCGGTACTCCGGCCGAGGCGTCCGGCCCGCCAGAAACGCCGTTGTCACACCGATGA
PROTEIN sequence
Length: 331
MLTGDGSRLEPFRTELTGYCYRMLGSGFEAEDAVQETLVRAWRSFDRYDEQRASLRTWLYSIANNICLDMLRSTQRRARAMDLGPAAKAGQGIGEPAPERTWIQPIPDSLAVPMNGNPEELAVQRETIRLAFVAALQYLPPRQRAVLILRDVLCWRAAEVARLLETTVASVTSALQRARSTLNAVELTPGEPFRPSDSAQRELLTRYCTAFERHDITALVALLHHDATMSMPPFMWWLRGHDHIRQALLDPDASCEGARLVPTAANGSPAFWQMRPGPAGSYVPFGLVLLDVFEGLITGITTYLDADRLVPLFGTPAEASGPPETPLSHR*