ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_7410_10

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 7701..8936

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family Tax=Frankia sp. (strain CcI3) RepID=Q2JE04_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 412.0
  • Bit_score: 357
  • Evalue 1.30e-95
Transposase, IS4 family {ECO:0000313|EMBL:KDA40790.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 408.0
  • Bit_score: 411
  • Evalue 1.40e-111
transposase, IS4 similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 412.0
  • Bit_score: 357
  • Evalue 3.60e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. BMG5.23 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
GTGCCCGCGCTGTCATTGTCGCGCGTGGGTGCGCGTGTGGTCGAGTCCGGTCCCGCCGGTGTGGGGCTGCCGGCGAAGACGTGGCAGCGGCTGGAGTCCCTGCCGGACCCGCGGTCGCCGCAGGGTCGTGTGTATCCGCTGGCCTGCCTGGTGGCGGTGGCGGTGTGCGCGTTCACCGCGGCCGGGCATGACCGGTTGACCGCGGTCGGGCAGTGGGTCAAGCGTGCCAGCCAGGCGGACCTGGCCCGGCTGCGGGCACCGTTCGACCCTATGGCCGGCCGATACCGGGCCCCGGATGAGAAGACGATCCGCGTCGTGCTGGACCGCCTCGACCCGCGGGCACTGGCCCGGGCGCTGCTCGGCCAGCGCCGAGATCCCCGCCCCCGCCCGCAAGGCTCCGGCGCGCGTGACTACCCGGCCCGGCGAGACAAGGCCCAGCACAGGGCGGCGGCCCGGTCCCGGCTGGTCGGCCTCGCCGTGGACGGCAAGACCAGCCGCGGAGCCCGCCGCGCGGACCGGTCCAGAGTGCACCTGCTCGGGGTGTGCGGCCACGACGGGCAGTTCCTGGACCAGATCGAGGTCGACGTCAAACACAACGAAACGAGCCACTTCCAGGAGTTACTCGCCCCACTAGAACTGACCCGGCAGGTGGTGACCTTCGATGCACTGCATACCGTGCGCGCCAACCTGGACTGGCTGGTAACCGCCAAGAGCGCCCACTACCTGGCGGTCGTGAAGAAAAATCAGCCGCTGCTATACGCCCGGCTCAAGGCGCTGCCCTGGGCGAAGATCCCCACCGGCGCCACCACCGGCGAGACCGGCCACGGCCGCCACGAAACCCGCACCCTCAAAACCGCCCACGTCGCAGGCCTGCCCATGCCGCACGCCCGGCAGGCGATCAGGATCACCCGCCACCGGCGCGACACCACCACCGGGAAGACCTCCCGCGAGACCGTCTACGCCGTCGCTACCCTCACCGCGGACGACGCCGGCCCCCACGACCTCGCCCGCCTCGCCCGGGAACACTGGACCGTCGAGGCGAACCACCACGTCAGGGACGTGAGCTTCACCGAGGACCACGCCAGCAGCCGCACCGGCCACGGACCGGCGAACCTCGCCACCATCCGCAACGCGGTCATCAACGCGATCCGCGGCGCCGGCTACCACCACATCCCCGAAGGCCGCCGCGACCACACCCAGCCGATCGACGCCCTCCACCTTCACGGCCTGCTATGA
PROTEIN sequence
Length: 412
VPALSLSRVGARVVESGPAGVGLPAKTWQRLESLPDPRSPQGRVYPLACLVAVAVCAFTAAGHDRLTAVGQWVKRASQADLARLRAPFDPMAGRYRAPDEKTIRVVLDRLDPRALARALLGQRRDPRPRPQGSGARDYPARRDKAQHRAAARSRLVGLAVDGKTSRGARRADRSRVHLLGVCGHDGQFLDQIEVDVKHNETSHFQELLAPLELTRQVVTFDALHTVRANLDWLVTAKSAHYLAVVKKNQPLLYARLKALPWAKIPTGATTGETGHGRHETRTLKTAHVAGLPMPHARQAIRITRHRRDTTTGKTSRETVYAVATLTADDAGPHDLARLAREHWTVEANHHVRDVSFTEDHASSRTGHGPANLATIRNAVINAIRGAGYHHIPEGRRDHTQPIDALHLHGLL*