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PLM1_60_b1_redo_sep16_scaffold_7410_13

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(10355..11083)

Top 3 Functional Annotations

Value Algorithm Source
Putative integrase/recombinase Tax=Rhodococcus opacus (strain B4) RepID=C1BDN6_RHOOB similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 234.0
  • Bit_score: 277
  • Evalue 7.60e-72
Integrase {ECO:0000313|EMBL:AII10835.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 236.0
  • Bit_score: 300
  • Evalue 2.00e-78
putative integrase/recombinase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 234.0
  • Bit_score: 277
  • Evalue 2.20e-72

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGACCGCAGCCCGCGGCTTCGCCCGCTACCTGTCCGGGATCGACGCGAGCACGCAGGTGCCACCACTGGGTCTGATGCCGCACCGGGCGCCGTGGCGCAGGCCGTTCATCTACTCCTCAGCTGACATCGAAGCGGTCATGGCCGAAGCACACCACCTGATCGGCTCCTCGCTGCGGGCGGCGACCTACGAGACGCTGATCGGGCTGCTCGCAGCGAGCGGGCTACGCATCGGTGAGGCCATCAAACTCGACCGTGACGACGTCGACTGGGTCCAGGGTGTGCTGCTGATCCGCGAGTCCAAGTTCGGCAAGTCACGTCTGGTGCCCCTGCACCCAAGCACCATGCAGGCACTCGCGGACTACGCCCAGCTACGCGACAAACACCAGCCCCAGCCCAGCCGGCCGAGCTTCTTCGTGTCCCTCAAACGCAAACGCCTGCTCTATGCCGTCGTGCAGCAGACGTTCAGACAGCTCATCGACGCCGCTGGCGTCGGCGTCGGCGCGCCCTCGCCGCCGAGGCTGCACGACATGCGCCATACTTTCGCGGTCCGCACCCTGCTGTGTTGGTACCGCGAAGCCGGGGACGTGCAGGCCAAAATCCCGTCGCTGTCGACCTACCTGGGACACCGCGAACCGGCCTCGACCTACTGGTACCTGTCCGCCGCCCCAGAACTGCTCGCACTGGCCGCTGCCCGGCAGGACACCGCATGGTCGGCGGCACGGTCATGA
PROTEIN sequence
Length: 243
MTAARGFARYLSGIDASTQVPPLGLMPHRAPWRRPFIYSSADIEAVMAEAHHLIGSSLRAATYETLIGLLAASGLRIGEAIKLDRDDVDWVQGVLLIRESKFGKSRLVPLHPSTMQALADYAQLRDKHQPQPSRPSFFVSLKRKRLLYAVVQQTFRQLIDAAGVGVGAPSPPRLHDMRHTFAVRTLLCWYREAGDVQAKIPSLSTYLGHREPASTYWYLSAAPELLALAAARQDTAWSAARS*