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PLM1_60_b1_redo_sep16_scaffold_18515_4

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(2286..2819)

Top 3 Functional Annotations

Value Algorithm Source
Putative LuxR-family transcriptional regulator Tax=Frankia alni (strain ACN14a) RepID=Q0RLE9_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 146.0
  • Bit_score: 129
  • Evalue 2.50e-27
Transcriptional regulatory protein,putative transcriptional regulator {ECO:0000313|EMBL:KJE23415.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 148.0
  • Bit_score: 136
  • Evalue 3.70e-29
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 146.0
  • Bit_score: 129
  • Evalue 6.90e-28

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGGGCGCGGTGCACACCCGCACCGACGGCAACCCGTTTTTCCTGGTCGAGCTGGTCCGGCTGCTGCAGGCCGAGGGTGGCCTGCACGACCCGGCCGCGGTGGAGCGCAGCCGGGTCCCGGTCGGGGTCAGGGATGTGATCCGCCGCCGTTTGGCGCGACTGCCCGAGCAGACCAACGCGCTGCTGGCGATCGCGGCGGTTGCCGGGCAGGAGTTCGACCTCGACGTGCTGGAGGTCGTCTCCGGGCTGGACGAGGGGGCACTGGACGCGGTGGAGGTGGCGTTGCTCACCGGGATCGTGCTTGAGAACGCCGACCGGCCCGGTCGCTACCGGTTCAGTCACGCGCTGATCCGGCAGACGCTGCACGACGGGATGAGCAGCGTACGCCGCGCTCGGCTGCACGCCCGGGTGGGGGACGCCCTGGAATCGCGCGCCCAGCCGCCCCGCGGCCGCCGAGCTGGCCGAACATTTCTTCCACGCGGCCGGCGTGGTCGGCCCGGACAAGGGCTACGCCTACGCGCTGCAAGCGAGTAG
PROTEIN sequence
Length: 178
VGAVHTRTDGNPFFLVELVRLLQAEGGLHDPAAVERSRVPVGVRDVIRRRLARLPEQTNALLAIAAVAGQEFDLDVLEVVSGLDEGALDAVEVALLTGIVLENADRPGRYRFSHALIRQTLHDGMSSVRRARLHARVGDALESRAQPPRGRRAGRTFLPRGRRGRPGQGLRLRAASE*