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PLM1_60_b1_redo_sep16_scaffold_351_35

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(30784..31566)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 250.0
  • Bit_score: 247
  • Evalue 3.40e-63
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 250.0
  • Bit_score: 247
  • Evalue 1.70e-62
tRNA pseudouridine synthase A Tax=Thermobifida fusca (strain YX) RepID=Q47LM3_THEFY similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 250.0
  • Bit_score: 247
  • Evalue 1.20e-62

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Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 783
GTGGCTGGCGCCGGCACCAGGCGCCGCCTCCGGCTGGTCGTCGCCTACGACGGCGCCCCGTTCTCGGGGTTCGCGCGCCAGCGGGACCGGCGCACCGTCCAGGGCGAGCTGGAGGCCGCCCTCTCCCGGGTCGCGAAGGAGCCGGTCGAGACCGTGGGGGCCGGCCGCACCGATGCCGGCGTGCACGCCCGCGGCCAGGTCGTGCACGCCGACGTGCCGGACCGGCTCGACCCCGAGCGGGTCCGCCGGGCGCTGAACGGCGCGCTCGGCCCGGCCGTGGTGGTCCGCGCGGCGGGCTGGGCGCCCGAGGGCTTCGACGCGCGCTTCTCGGCCCGGCGGCGCACCTACGTCTACCGGGTCGACGACTCCCCCGACCCCGACCCCCTGACCCGCGGCTGGGTGCTGCACTGGCGCCGTCCCCTGGACGTCGAACGGATGCGGGAGGCGGCCCGCCCGCTCGTGGGCGAGCACGACTTCGCCGCCTTCTGCCGGGGCCGGCCCGGGGCGACGACCCGGCGCCGGATGCGGTCGATCACCGTGCGCCGCGTCCGCGGCCTGGTCGAGGTGCGCGTCGTGGCCGACGCGTTCTGCTGGCAGATGGTGCGCAGCATCGTCGGCCACCTGCTCGACGTGGGCGACGGCCGCCGGGAGCCCGATCGCACCGCCGCGATCCTCGCCGCCGGGGACCGGTCCGCGCTCGGCAACATCGCCCCTCCGCACGGCCTCGTCCTCGAGTCGGTCAGCTACGCACCCAAGTTGACCGTTCCGGGGAGGAACCGCTAG
PROTEIN sequence
Length: 261
VAGAGTRRRLRLVVAYDGAPFSGFARQRDRRTVQGELEAALSRVAKEPVETVGAGRTDAGVHARGQVVHADVPDRLDPERVRRALNGALGPAVVVRAAGWAPEGFDARFSARRRTYVYRVDDSPDPDPLTRGWVLHWRRPLDVERMREAARPLVGEHDFAAFCRGRPGATTRRRMRSITVRRVRGLVEVRVVADAFCWQMVRSIVGHLLDVGDGRREPDRTAAILAAGDRSALGNIAPPHGLVLESVSYAPKLTVPGRNR*