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PLM1_60_b1_redo_sep16_scaffold_351_40

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(34918..35298)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 Tax=Frankia sp. (strain EuI1c) RepID=E3J389_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 126.0
  • Bit_score: 210
  • Evalue 6.00e-52
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 126.0
  • Bit_score: 210
  • Evalue 1.70e-52
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 126.0
  • Bit_score: 210
  • Evalue 8.40e-52

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCAAGAATCTCGGGCGTCGACCTCCCCCGCGACAAGCGGGTGGAGATCGGCCTCACCTACATCTACGGCCTCGGCCACACCCGCGCCCTGGAGGCGGTCAAGGGGACCCGGGTGAACCCCAACACCCGCGTCCGCGACCTGTCCGAGGAGGAGGTCGTCCGCCTGCGGGAGTGGATCGACTCCCACTACAAGGTCGAGGGCGACCTGCGCCGCGAGGTCGCCCAGGACATCAAGCGCAAGATCGAGATCGGCTGCTACCAGGGCATCCGGCACCGCCGCGGCCTGCCCGTGCGGGGCCAGCGCACCCACACCAACGCCCGCACCCGCAAGGGCCCCAAGAAGACGGTGGCCGGCAAGAAGAAGGCCACCAAGAAGTAG
PROTEIN sequence
Length: 127
MARISGVDLPRDKRVEIGLTYIYGLGHTRALEAVKGTRVNPNTRVRDLSEEEVVRLREWIDSHYKVEGDLRREVAQDIKRKIEIGCYQGIRHRRGLPVRGQRTHTNARTRKGPKKTVAGKKKATKK*