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PLM1_60_b1_redo_sep16_scaffold_65_31

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(35091..36284)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8G6_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 389.0
  • Bit_score: 551
  • Evalue 5.90e-154
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KJK45954.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 389.0
  • Bit_score: 570
  • Evalue 1.70e-159
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 389.0
  • Bit_score: 551
  • Evalue 1.70e-154

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
GTGGTAGCGATCCTCGAGCAGGTCTTCCGCGACCAGTGGGGACGTGTTCTGGCTGCGCTGATCGGCTTCCTCGGCGACTTCGACCTCGCCGAGGAAGCCGCGCAGGAGGCCTTCGCGATCGCCGCGGAGCGCTGGCCTCGAGACGGGGCCCCCGCCAACCCGGGCGCCTGGCTGGTGACGACGGCGCGCAACCGAGCCATCAACCGCATCCGCCGCGATCGCACGCTGGCCGCGAAGACTCGCCTGCTCCAGGTGCCCGAGGCAGCGGAGGACACGATGGACGCGACGACGTTTCCCGACGAGCGACTCGAGCTCATCTTCACCTGCTGTCATCCGGCGCTGGCCACCGACGCGCAGGTCGCGCTCACCCTGCGGACGCTCGGCGGCCTGACCACCGGCGAGATCGCCCGCGCCTTCCTGGTCCCCGAGCCCACGATGGCCCAGCGGCTGGTGCGCGCGAAGCGCAAGATCAAGTCGGCGGGGATCCCGTTCCGCGTGCCTCCCGACCATCTGCTGCCCGATCGGCTCGTCGCCGTGCTCGCGGTCGTCTACCTGATCTTCAACGAGGGCTACGGGGGCCGAGGCGAGCTCGCGGCCGAAGCGCTCCTGCTCGGGCGAGCGCTGGCCGAGCTGCTGCCCGACGAGCCGGAGGTGCACGGGCTGTTGGCGATGATGCTGCTGCTCGATGCCCGCCGCGAGGCGCGGTTCCGTGGCGGCGACCTGGTGCTGCTCGCCGGCCAGGACCGTTCGCTCTGGGACACCGCCCAGATCGCCGACGGGCGGGCGGTGCTCGACCGGGCCCTCGCCCTGCACGGACGCGGCCCCTACGTCGTGCAGGCGGCGATCGCGTCCCTGCATGCCGACGAGCCGCGCGACTGGCCGCAGATCGCCGCCCTCTACGGCGAGCTTTTCCGCCTCACCGGCTCGCCGGTCGTGGAGCTGAACCGGGCCGTCGCGGTCGCCGAGTCGGAGGGGCCCGAGGCGGGGCTCGGCATCGTCGATCGCCTCGAGCTCGACGACTACCGCTACCTGCACGCGACGCGGGGCGAGCTGCTGCGGCGCCTCGGCCGAACCGAACAGGCCCGCGACGCGTACCGCAGAGCGCTGGCGCTGGTCCACGACGACGCCGAGCGGCGCCTGCTCGAGCGGCGGGTGGCAGCGCTCGGGAGGGCGCCGGCCCCAGAGCGACGATGA
PROTEIN sequence
Length: 398
VVAILEQVFRDQWGRVLAALIGFLGDFDLAEEAAQEAFAIAAERWPRDGAPANPGAWLVTTARNRAINRIRRDRTLAAKTRLLQVPEAAEDTMDATTFPDERLELIFTCCHPALATDAQVALTLRTLGGLTTGEIARAFLVPEPTMAQRLVRAKRKIKSAGIPFRVPPDHLLPDRLVAVLAVVYLIFNEGYGGRGELAAEALLLGRALAELLPDEPEVHGLLAMMLLLDARREARFRGGDLVLLAGQDRSLWDTAQIADGRAVLDRALALHGRGPYVVQAAIASLHADEPRDWPQIAALYGELFRLTGSPVVELNRAVAVAESEGPEAGLGIVDRLELDDYRYLHATRGELLRRLGRTEQARDAYRRALALVHDDAERRLLERRVAALGRAPAPERR*