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PLM1_60_b1_redo_sep16_scaffold_213_11

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(5779..7143)

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle Tax=Salinispora pacifica RepID=UPI00035CF947 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 469.0
  • Bit_score: 535
  • Evalue 3.80e-149
signal recognition particle protein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 472.0
  • Bit_score: 532
  • Evalue 9.10e-149
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 472.0
  • Bit_score: 532
  • Evalue 4.50e-148

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Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
GTGTTCGATACCCTCTCCGACCGCCTCCAGGACGTCTTCTCCAAGCTCCGGGGGTACGGACGGCTCTCGGAGGCGCAGGTCGACGCCGCCCTGCGCGAGGTGCGCCTCGCCCTGCTCGAGGCGGACGTCAACTTCAAGGTCGTCAAGGACTTCATCGGCCGCGTGCGCGCCAGGGCCGTCGGCGAGGAGGTCACCCGCAGCCTCACCCCGGCCCAGCAGGTCATCAAGATCGTCCACGAGGAGCTCGTCACCACCCTGGGCGGGCGCAACGAGCCGCTCACCTTCGCCCCCAAGCCCCCCACGGTGGTGCTGCTCGCCGGGCTCCAGGGCTCGGGCAAGACCACCACGGCGGCCAAGCTCGCCCGCTGGCTGGCGGGCAAGGGCCGCAAGCCGCTCCTGGTCGCCTGCGACCTGCAGCGCCCCGCCGCCGTCAAGCAGCTCCGGGTGCTCGGCGAGCAGGCCAAGGTGCCCGTGTACGCGCCCGAGGACGGCTCCGGGCCCGACGGGGTGGCGGGTGGGGCTGGAGGATCGGCCGACCCGGTCGCGGTCGCCCTCGGCGCCCGCGCCGCCGCCGAGCAGGCCGGCCACGACGTCGTGATCGTCGACACCGCCGGCCGGCTCTCGATCGACACCGAGATGATGGCCCAGGCGGCCGCCATCAAGGACGCTGTCGCGGCAACCGAGGTCCTGCTCGTGGTCGACGCGATGACCGGCCAGGACGCGGTGCAGACGGCCGTCGCGTTCCAGGAGGGCGTCGACGTCACCGGCGTCGTCCTCTCCAAGCTCGACGGCGACGCCCGTGGCGGCGCCGCGCTCTCGATCCGCACGGTCACCGGCCGTCCCATCAAGTTCGCCACCACCGGGGAGAAGCTCGGCGACTTCGACGCCTTCCACCCCGACCGGCTCGCCGGCCGCATCCTCGGCATGGGCGACGTGCTCACCCTGATCGAGCGGGCCGAGGAGCTGGTCGACCGCCAGCAGGCCGAGGACATGGAGCGCAAGCTCCGCGAGGCCAGCTTCACCCTCGAGGACTTCCTCGACCAGCTCCAGCAGGTCAAGCGGATGGGCCCCCTCAGCCAGGTCCTCGGCATGCTGCCCGGCATGAGCCAGCAGCTCAAGGGGGTCGAGGTCGACGACCGCGACCTGGCCAGGGTGGAGGCGATCATCCGCTCCATGACCCCCCGCGAGCGCGCCAACCCCAAGATCCTCAACGGGTCAAGGCGGGCCCGCATCGCGCGCGGCTCGGGCACCACCACCCAGCAGGTCAACGCGCTGGTCAAGCAGTTCCACGAGGCCCGCAAGATGATGAAGCAGCTCACCGGCATGAGCCCCAAGCGGCTGCGCAAGATGGGCCTCGGGCGCTGA
PROTEIN sequence
Length: 455
VFDTLSDRLQDVFSKLRGYGRLSEAQVDAALREVRLALLEADVNFKVVKDFIGRVRARAVGEEVTRSLTPAQQVIKIVHEELVTTLGGRNEPLTFAPKPPTVVLLAGLQGSGKTTTAAKLARWLAGKGRKPLLVACDLQRPAAVKQLRVLGEQAKVPVYAPEDGSGPDGVAGGAGGSADPVAVALGARAAAEQAGHDVVIVDTAGRLSIDTEMMAQAAAIKDAVAATEVLLVVDAMTGQDAVQTAVAFQEGVDVTGVVLSKLDGDARGGAALSIRTVTGRPIKFATTGEKLGDFDAFHPDRLAGRILGMGDVLTLIERAEELVDRQQAEDMERKLREASFTLEDFLDQLQQVKRMGPLSQVLGMLPGMSQQLKGVEVDDRDLARVEAIIRSMTPRERANPKILNGSRRARIARGSGTTTQQVNALVKQFHEARKMMKQLTGMSPKRLRKMGLGR*