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PLM1_60_b1_redo_sep16_scaffold_153_27

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 30369..30995

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR Tax=Frankia sp. CN3 RepID=G6HMB9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 192.0
  • Bit_score: 169
  • Evalue 1.90e-39
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFC86305.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 200.0
  • Bit_score: 168
  • Evalue 6.00e-39
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 192.0
  • Bit_score: 166
  • Evalue 7.90e-39

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGATCGTCAAGAGGGGGTATTATTGCGATATGCCCAGAAACCGGCAGAACGTCCCCCGTGAGGAGCGGGTCCGCGAGCTCGTCGACGTCGCGCGCCGGCTGTTCCTCGAGCGTGGCTACGCCGCCACCTCGATCGCCGACATCGCGCGCGAAGCCGGCCTGGCCGCCAACAGCGTGTACTGGTACTTCCCGACCAAGGACCACGCCTTCGCCGCGGTCCTGGACCGCCTGCTCGCCGACGAAGCCGAGCGGGACGAGGTCGGGCGGGACGGGGTCGGGGGCGCCCCGGCCCGGGAGGACCCCGCCGGCGACCCGGTGGACCGGCTGTTCGCCCTGCTGGAGCGGCTCGAGGACTACCGGCTGCTCCAGCCCGTCGTCCACGAGCGGGTGCCGCACGCACCGGCGGTCGCCGACTTCCACGAACGGGCCCACGGCTTCCTCGAGCAGCTGCTCTCCGAGGCGCTCGAGCACCGGCTGCCGCCGGGCGAGGACCGGGAGCTGGCCGCCGCCGCGGTCGCTGCGACGCTCGAGGGCGCCCTGTCCCACGCCGAGTCCAAGTACTCCCACGTCGAGGTCGTCCGGTTCGTCCTGGACCGCATGAGCGCCGCCCCTCCGGGCCGTACCTGA
PROTEIN sequence
Length: 209
MIVKRGYYCDMPRNRQNVPREERVRELVDVARRLFLERGYAATSIADIAREAGLAANSVYWYFPTKDHAFAAVLDRLLADEAERDEVGRDGVGGAPAREDPAGDPVDRLFALLERLEDYRLLQPVVHERVPHAPAVADFHERAHGFLEQLLSEALEHRLPPGEDRELAAAAVAATLEGALSHAESKYSHVEVVRFVLDRMSAAPPGRT*