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PLM1_60_coex_sep16_scaffold_8473

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_8473_1
GWC2_OD1_43_8, Giovannonibacteria, Parcubacteria, Bacteria

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comp(196..564)
DNA (369bp) protein (123aa)
Septum formation initiator Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E6N6_GEOLS
Septum formation initiator family protein {ECO:0000313|EMBL:KKT21385.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_43_8.;"
ftsB; cell division protein FtsB
PLM1_60_coex_sep16_scaffold_8473_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(589..1929)
DNA (1341bp) protein (447aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
Enolase Tax=Geobacter sulfurreducens RepID=ENO_GEOSL
eno; enolase
PLM1_60_coex_sep16_scaffold_8473_3
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1979..3184)
DNA (1206bp) protein (402aa)
hemL; glutamate-1-semialdehyde 21-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
glutamate-1-semialdehyde 2,1-aminomutase Tax=Methyloversatilis sp. NVD RepID=UPI00037A5C15
PLM1_60_coex_sep16_scaffold_8473_4
RBG_19FT_COMBO_Deltaproteobacteria_58_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3187..3915)
DNA (729bp) protein (243aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEU5_9BACT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_58_16_curated
PLM1_60_coex_sep16_scaffold_8473_5
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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comp(3912..4928)
DNA (1017bp) protein (339aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHE3_THEYD
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM1_60_coex_sep16_scaffold_8473_6
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(4941..6011)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJZ4_9BACT
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM1_60_coex_sep16_scaffold_8473_7
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(6008..6529)
DNA (522bp) protein (174aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
3-isopropylmalate dehydratase small subunit 1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=LEUD1_PYRAB
PLM1_60_coex_sep16_scaffold_8473_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(6606..7433)
DNA (828bp) protein (276aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Tryptophan synthase alpha chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFE2_9BACT
PLM1_60_coex_sep16_scaffold_8473_9
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(7426..8289)
DNA (864bp) protein (288aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
TrpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM1_60_coex_sep16_scaffold_8473_10
CSP1_5_NC10, NC10, Bacteria

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8398..8544
DNA (147bp) protein (49aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
tryptophan synthase subunit beta
Tax=CSP1_5_NC10
Displaying 10 items

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