ggKbase home page

PLM1_60_coex_sep16_scaffold_8962_5

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: comp(3689..4618)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D371_PELTS similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 281.0
  • Bit_score: 269
  • Evalue 3.50e-69
AroE; shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 281.0
  • Bit_score: 269
  • Evalue 9.80e-70
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 280.0
  • Bit_score: 287
  • Evalue 1.30e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_45_22 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 930
ATGTCGCGGATTACGTCACCTGTGGAGAAGGAAAACGTGCCCTCAGCCGATAACCCGACTATGCTATACGGAATTTTTGGCTATCCGATCGGCCATTCGTTGTCGCCGCTCATGCATAACGCTGCCTTTGCCCACCATGGGATCGAGGCTGTGTATCTCCCCTTTGCGGTACACCCAGCCCACCTCGAGATCGCGGTCAAATCGATTGCTGCCCTGCCCATCCACGGAGTGAATGTGACAATTCCCCATAAGCAAGCGGTCATGACTTGGCTGGATGACTTATCACCAGAGGCACGCTTGATCGGAGCGGTCAACACGATTCACCTGCGGGATGGCCGTTTGTACGGAGATAACACTGATGGGATTGGCTTCTTGCGCTCCCTCGCTGAAGCGGGAAGTCAGGTGGAGGACCGTACAGTGATGTTGTTGGGGGCCGGCGGAGCGGCCCGTGCCATTGCTGTGCAGCTGTGCTTGGCGGGCATCCGTCGCCTCTATCTGGCCAATCGCACGCCAACACGTGCCGAGGCACTCGCCGCTTTTCTTAAGCAAAATATCCCCCATGCCGATATTAGCGTTATCGCCATGGGGGAATCATCGCTAGCAGCCCATCTCTCCCACACCGATATCGTGGTGAATGCTACTTCCAGTGGGATGCATGCCCACGATCCCATGATCCTCCCATCCACCGAACTAGGGCCACGGCACCTAGTGTGCGACATTGTGTATCGACCTCTACACACGCTGCTATTGCGGGCGGCACAGCGACAGGGCGCTCGCACTGTGGATGGTTTGGGCATGTTGCTCCATCAGGGTGCACAAGCCTTCGAGATTTGGACTGCACGTGTCTTGCCGATTTCGTTGATCCGGGAACGATTATTGCTCGCTCTCGCCGAACAGCCGACCGCCAGTTCTCCACCGCGCAAGGAGTGA
PROTEIN sequence
Length: 310
MSRITSPVEKENVPSADNPTMLYGIFGYPIGHSLSPLMHNAAFAHHGIEAVYLPFAVHPAHLEIAVKSIAALPIHGVNVTIPHKQAVMTWLDDLSPEARLIGAVNTIHLRDGRLYGDNTDGIGFLRSLAEAGSQVEDRTVMLLGAGGAARAIAVQLCLAGIRRLYLANRTPTRAEALAAFLKQNIPHADISVIAMGESSLAAHLSHTDIVVNATSSGMHAHDPMILPSTELGPRHLVCDIVYRPLHTLLLRAAQRQGARTVDGLGMLLHQGAQAFEIWTARVLPISLIRERLLLALAEQPTASSPPRKE*