ggKbase home page

PLM1_60_coex_sep16_scaffold_17153_9

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: comp(4425..4661)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B6A7CE similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 76.0
  • Bit_score: 104
  • Evalue 2.90e-20
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 76.0
  • Bit_score: 103
  • Evalue 1.80e-20
UPF0109 protein HL41_00445 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium commune DSM 2178.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 76.0
  • Bit_score: 103
  • Evalue 8.90e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermodesulfobacterium commune → Thermodesulfobacterium → Thermodesulfobacteriales → Thermodesulfobacteria → Thermodesulfobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGATGAAGGACTTGGTGACGACGATTGTGAAGGCCATTGTCGACTATCCTAATGCGGTGGAAGTGAAGGAGGTGGATGGAGAGCGGACCACGGTGATTGAGCTACGAGTGGCCAAGGAAGACGTCGGCAAAGTCATTGGCAAGCAGGGTCGGATTGCAGAGGCCATACGCGTCATTCTTGGAGCGGCTGGCGCCAAGATCAGGCGCAAGATCGAACTCGAAATTCTGGAATGGTAG
PROTEIN sequence
Length: 79
MMKDLVTTIVKAIVDYPNAVEVKEVDGERTTVIELRVAKEDVGKVIGKQGRIAEAIRVILGAAGAKIRRKIELEILEW*