ggKbase home page

PLM1_60_coex_sep16_scaffold_20871_6

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 4138..4425

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 96.0
  • Bit_score: 159
  • Evalue 1.60e-36
Cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 96.0
  • Bit_score: 154
  • Evalue 8.40e-36
Tax=CSP1_8_Deltaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 96.0
  • Bit_score: 157
  • Evalue 4.90e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_8_Deltaproteobacteria → 43F-1404R → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGCAAAAACTTGCTGAAGTCTGCATTCGCCGCCCGGTATTTGCGGCAATGATCGTTATGGCGTTGGTGGTGGCCGGTGCGGCCAGCTACTTCCGGCTGGGCGTGGATCGTTTTCCGTCAGTCGATCTCCCCACTCTTTCCATCCGCACGACACTGCCAGGCGCTTCGCCGGAAGAGGTCGAAGCCGAGATCGCCCAGCGGATTGAGGAGGCCGTCAATTCGGTGGAGGGCATTGAAGAGCTGCGTTCGATCTCTGGGCAAGGCAGCTCGATCATCATCGTCACATTT
PROTEIN sequence
Length: 96
MQKLAEVCIRRPVFAAMIVMALVVAGAASYFRLGVDRFPSVDLPTLSIRTTLPGASPEEVEAEIAQRIEEAVNSVEGIEELRSISGQGSSIIIVTF