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PLM1_60_coex_sep16_scaffold_22444_2

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: comp(606..1451)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Niabella aurantiaca RepID=UPI0003635FD2 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 233.0
  • Bit_score: 214
  • Evalue 1.20e-52
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 242.0
  • Bit_score: 205
  • Evalue 1.20e-50
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00176.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 242.0
  • Bit_score: 205
  • Evalue 6.00e-50

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 846
ATGGACGCCAGCGATAACCAACTTGTGGCCCAGGCGATATCAGGCGATGACGACGCCTTTGCGCAGCTGGTATTGCGCTATCAGGGCGTCATCAAATCCTACCTGTATCGTCTGACGGCCTGCCGCGAGGATGCTGAGGATCTGGCCCAGGAGGTCTGGATCCGTGTGTTCACACAGTTGGGCAGGGCCGAAGAGCGATCGAGCGTACGCACCTGGCTCTTTGCCACCGCCACGCAGGTGGCCATGGAGCATGACCGAGCCAGGGCGCGCTGGCCTGTGGAGGCCCAGGACAAAGCCAAAGCCTTAGCCGATGCCGACCCGGAGATCCTCGACCTCCTCCACCAGACGCATTGGGAGTCGCCCCACGCGCGCTACGAGATGCGCGAACACATCGACTTTTGCTTCACCTGCATCATGAAAACCCTGCCGCTCGATGCACACATAGCATTCATGCTCTGTGAGATCTATGATTGCACCGAGGCCGAGGCGGCCGAGGTGCTGGGGCGTTCGGTTGACGCCGTCAAAGGTGTGTTGGATCAAGCGCGCACGACGATGAAGCGCATTTTTGAGCCGCGCTGTAGCTTGATAAATCAGCAGGGTCTTTGTCACCAGTGCCCTGAGCTGAATGGGTTGTTCAATCCATACCAGGCCGAGCCGCAGGAGTTGGCCAAGCTCGAGCTGGTGCGGGCTGCTCAGCATCCACCGCGGGAGCGCAGCACAGCCGTTCACCCTGATCCCCTCATCAGGCCCCGCGTCTTTCTCCTCATGCGAGAGACCCCACCTGTTACCCATGCCCTCACGGAGACCAGCAATTCGTGGCGATGGAGTCAGTGGTGGAGTCTCTGA
PROTEIN sequence
Length: 282
MDASDNQLVAQAISGDDDAFAQLVLRYQGVIKSYLYRLTACREDAEDLAQEVWIRVFTQLGRAEERSSVRTWLFATATQVAMEHDRARARWPVEAQDKAKALADADPEILDLLHQTHWESPHARYEMREHIDFCFTCIMKTLPLDAHIAFMLCEIYDCTEAEAAEVLGRSVDAVKGVLDQARTTMKRIFEPRCSLINQQGLCHQCPELNGLFNPYQAEPQELAKLELVRAAQHPPRERSTAVHPDPLIRPRVFLLMRETPPVTHALTETSNSWRWSQWWSL*