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PLM1_60_coex_sep16_scaffold_85117_5

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 2162..2701

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein RNP-3 bin=CNBR_ACIDO species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 203.0
  • Bit_score: 133
  • Evalue 1.30e-28
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 145.0
  • Bit_score: 79
  • Evalue 1.10e-12
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 191.0
  • Bit_score: 137
  • Evalue 1.30e-29

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCCGGTTCGACTGTTTGTTGGAAATCTTTCGTACGATGCGACCGAGGCCGATCTCAGAGAGCACTTCTCCTATCTCCCAACCGATAGGGAGAGTGGTCGGCCGCGAGGGTTTGCCTTTATCGAATTCCCCGATCAAGCGCAAGCCGATGAGGCCATACGCCGCTTTAATAATCAGCTGTTTAAAGGCAGGCCGTTGGCGGTCAATGAAGCCCGCACGCGAGACAGTAGCCCTGGTGTCAGAAGAGATGCGCCAGCGCCTCCGGCTCGTACGAGAGGGGTGGCCGAGCCGGATAGCGCTGAACGGCCGGCGCGCGGCGGTGGTCCAAGTCGCCAATTCGGTCCAGACGCGGCGCCTCGGCGGAGCCGCAAGCATGCGAGCCGCCGCCCGGAACCGGAGCGCGGCCCCAAGCGACAGATCCGTGAACGGCATGGTGGGCAATTCTTCGGTGGGGATGTGGACGATTCTGGCGATGACGATCTCAGCGAAGAGTCCTTCGCCCGTCGCATGGACGATGCGCCAAGCGAAGACAATGCCTAA
PROTEIN sequence
Length: 180
MPVRLFVGNLSYDATEADLREHFSYLPTDRESGRPRGFAFIEFPDQAQADEAIRRFNNQLFKGRPLAVNEARTRDSSPGVRRDAPAPPARTRGVAEPDSAERPARGGGPSRQFGPDAAPRRSRKHASRRPEPERGPKRQIRERHGGQFFGGDVDDSGDDDLSEESFARRMDDAPSEDNA*