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PLM1_60_coex_sep16_scaffold_3938

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3938_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3..170
DNA (168bp) protein (56aa)
UPF0271 protein PYCH_17190 bin=GWC2_Methylomirabilis_70_24 species=Pyrococcus yayanosii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
protein YbgL
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3938_2
unknown

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170..613
DNA (444bp) protein (148aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_3938_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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638..1759
DNA (1122bp) protein (374aa)
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10)
Aminomethyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3938_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1771..2163
DNA (393bp) protein (131aa)
Glycine cleavage system H protein bin=GWC2_Methylomirabilis_70_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glycine cleavage system H protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3938_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2166..3509
DNA (1344bp) protein (448aa)
protein GcvPA; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glycine dehydrogenase
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_3938_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3517..4986
DNA (1470bp) protein (490aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3938_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5045..5866
DNA (822bp) protein (274aa)
Octanoyltransferase LipM bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lipoate protein ligase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3938_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5833..6141
DNA (309bp) protein (103aa)
Hydrolase, NUDIX family bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NUDIX hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3938_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6147..7523
DNA (1377bp) protein (459aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase bin=GWC2_Methylomirabilis_70_16 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

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