ggKbase home page

PLM1_60_coex_sep16_scaffold_2684_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1748..4123

Top 3 Functional Annotations

Value Algorithm Source
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 791.0
  • Bit_score: 1245
  • Evalue 0.0
DNA gyrase subunit B similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 801.0
  • Bit_score: 874
  • Evalue 1.30e-251
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 790.0
  • Bit_score: 1262
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2376
ATGGCCGACACGTATACCGCGAGTGACATCAAGGTCCTCGAGGGGCTCGAGGCGGTCCGCAAGCGCCCGGCCATGTACATCGGCGACACGGGCGCCTACGGGCTCCACCATCTCGTCTACGAGGCGGTGGACAACTCGGTCGACGAGGCGCTGGCCGGCTACTGCGACAGCATCAAGGTCATCCTGCACTCCGACAGCTCCTGCTCGGTGGGCGACAACGGCCGCGGCATCCCGGTGGACATCCACAAGGAAAGCGGCCGGCCGGCGGCGGAAGTCGTGCTCACCGTGCTCCACGCGGGCGGCAAGTTCGAGCACTCCGCCTACAAGGTCTCGGGCGGCCTGCACGGCGTCGGCATCTCGGTGGTCAACGCGCTGTCGGAGTGGCTCGAGCTCGAGATCCGGCGGCAGGGCAAGGTGTGGACGCAGCGCTACGAGTACGGGGTACCGCAGGGCGAGCTGGCCGCGACCGACAAGACGACCAAGCACGGCACCATCGTGCAGTTCAAGCCGGACGCGAAGATCTTCGAGGAGACGACGTTCTCGTTCGACACCCTCTCGAACCGCCTCCGCGAGATGGCCTTTCTCAACAAGGGCCTCAAGATCGTCATCGAGGACGAGCGCGACGGCCGCAGCCACACGTTCCTCTACAAGGGCGGCATCATCGAGTTCATCAAGCACCTCAACCAGAACAAGACGCCGATCCACCCGAAGGTGCTCTTCTTCGAGGGCAAGAAGGACAATATCGAGGTGGAGGTGGCGCTCCAGTACAACGACGGCTACCAGGAGAGCGTGTTCTCCTTCGCCAACAACATCAACACGCGCGAGGGCGGCACCCACCTCACCGGGTTCCGGGCCGCGCTGACCGGCACCCTCTCCAACTACGCCAAGGCCAACGGCTTCCTCAAGAGCTTCAAGGGCGACGTCAGCGGCGACGACGTGCGCGAGGGCCTGACCGCGGTGGTCTCGGTGCGGATCCCCGATCCGCAGTTCGAGGGCCAGACGAAGGCCAAGCTCGGCAACTCCGAGATCAAGGGGCTCGTCCAGCAGATCGTCAACGACCGGCTCGCCGAGGTTTTCGAGGAGGACCCGACCACCGCGCGCAAGATCGCCGACAAGTGCGTGCGCGCGGCCCAGGCCCGCGAGGCCGCGCGCAAGGCGCGCGAGCTGACCCGCAAGGGCGGGCGGGACGAGGAGGGCCTCGCGGCCAAGCTCGCGGACTGCTCGGAGCGGGAGCCGCAGTTCCGCGAGATCTTCCTGGTCGAGGGCGACTCCGCCGGAGGCTCGGCCAAGCAGGGCCGCGACCGGAAGACCCAGGCGGTGCTGCCGCTGCGGGGCAAGATCATCAACGCGGAGAAGGCGCGCTACGACAAGGTGCTGTCCCACAATGAAATCCGGCTGCTGATCTCGGCCCTCGGCACCGGGATCGGCCCCGAGGAGTTCGACGTCAGCAAGCTGCGCTACCACAAGGTGATCCTGATGACGGACGCCGACGTGGACGGCGCCCACATCCGCACCCTGCTGCTCACGTTCTTCTTCCGGCACATGGTCCAGGTGATCGAGGCGGGGCATCTGTTCATCGCGCAGCCGCCGCTGTTCAAGGTGAAGAAGGGGCGGGCCGAGAAGTACCTGATGAGCGAGCGGGAGATGGAGGAGTTCCTGCTCGAGCAGTGGGTGGAGAAGGCGAGCATCAAGGTTCCCGGCAAGGCGGCCCCCTTGCGGGGCGAGGCCTTGATGGAGTCGCTCAAGCGCGTGCTCGAGTTCCGCGTCCTGTTCGCCAAGCGGGTGCGCCGGGGCGTCCCGAGCGCGATCCTGGATGGCCTGCTGCGCAAGAAGTTCAAGGCCACCAAGCGCGGCGTCGGCGACGCCGAGATCGCGGCGGCGGTGAGCGAGGTGGCCGCGGAGCTGCCGGGCTGGACGGCCCGCCTCGGAGGCGCGGACAACGGCGACGCGGCCACCGTGGAGATCACCGGCCCGCACCCCGCGCAGTTCAGCGTCGACGTGCTCAAGTCGCCGGACTACGCGCAGCTCTTCGAGCTGCACGCCGAGATCGCGGGCCTGCACAAGGGCCCGTGCACGATCGTGGACGCGGCCGAGAAAGAGATCGAGACGAAGAGCCTGGACGCGCTGATGCGGACGGTCCTCGAGCAGGCCAAGGACGGGGCGACGCTGCAGCGCTACAAGGGGCTCGGCGAGATGAACCCCGAGCAGCTCTGGGAGACGACCATGAACCCGGAGACCCGCACCCTCCTGCGCGTGACCATGGAAGACGCGGTCGGCGCCGATGAGATGTTCACGGTGCTGATGGGCGATGCGGTGGAGCCGCGCCGCGAGTTCATCGAGAAGAACGCGCTCGACGTCGTCAACCTCGACATCTAG
PROTEIN sequence
Length: 792
MADTYTASDIKVLEGLEAVRKRPAMYIGDTGAYGLHHLVYEAVDNSVDEALAGYCDSIKVILHSDSSCSVGDNGRGIPVDIHKESGRPAAEVVLTVLHAGGKFEHSAYKVSGGLHGVGISVVNALSEWLELEIRRQGKVWTQRYEYGVPQGELAATDKTTKHGTIVQFKPDAKIFEETTFSFDTLSNRLREMAFLNKGLKIVIEDERDGRSHTFLYKGGIIEFIKHLNQNKTPIHPKVLFFEGKKDNIEVEVALQYNDGYQESVFSFANNINTREGGTHLTGFRAALTGTLSNYAKANGFLKSFKGDVSGDDVREGLTAVVSVRIPDPQFEGQTKAKLGNSEIKGLVQQIVNDRLAEVFEEDPTTARKIADKCVRAAQAREAARKARELTRKGGRDEEGLAAKLADCSEREPQFREIFLVEGDSAGGSAKQGRDRKTQAVLPLRGKIINAEKARYDKVLSHNEIRLLISALGTGIGPEEFDVSKLRYHKVILMTDADVDGAHIRTLLLTFFFRHMVQVIEAGHLFIAQPPLFKVKKGRAEKYLMSEREMEEFLLEQWVEKASIKVPGKAAPLRGEALMESLKRVLEFRVLFAKRVRRGVPSAILDGLLRKKFKATKRGVGDAEIAAAVSEVAAELPGWTARLGGADNGDAATVEITGPHPAQFSVDVLKSPDYAQLFELHAEIAGLHKGPCTIVDAAEKEIETKSLDALMRTVLEQAKDGATLQRYKGLGEMNPEQLWETTMNPETRTLLRVTMEDAVGADEMFTVLMGDAVEPRREFIEKNALDVVNLDI*