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PLM1_60_coex_sep16_scaffold_2871_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1290..2549

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor bin=GWC2_Syntrophus__56_31 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 33.0
  • Coverage: 421.0
  • Bit_score: 229
  • Evalue 3.20e-57
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 408.0
  • Bit_score: 218
  • Evalue 2.10e-54
Tax=RBG_16_NC10_65_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 336.0
  • Bit_score: 343
  • Evalue 2.70e-91

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Taxonomy

RBG_16_NC10_65_8_curated → NC10 → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAGCCCCACCACGCGGCGAACGATGCTCAAGACCCTCGCGGGAGCCGGCGCGGTCAGCGCGGTCTCCGGATTCCCCTTCGTCAACCGGCTCGCCTTGGGCCAGCAGGCGATCAAGGTCGGGGTGGTGGTGCCGATGACCGGGCCGATGGCGCTCGAGGCCCAGGAGATGCTGACCGCCACCCAGATCGCGGTCGAGGACGTCAACGCGGCGGGCGGCGTGATGGGCCGGAAGGTCGAGACGGTCATCCGCGACTCCGAGTTCAAGCCCGAGGTGGCGAAGCGCAAGGCCACCGAGCTGATCGAGGTGGAGAAGGCGGCGTTCCTCGTTGGCGCCATCGTGGGCTTCGAGGGGATCGCGATGGCGGAGGTCGGCTGCAAGAACGACGTGATCGTGAGCTTCTTCGGCCAGAACTTCCTGACCATCAAGGGCAAGATGTGCAAGTACCAGTTCGGCAACAACCTCACGCCCTACCAGACCGCGGCGGCCGCCGCGCACTTCGTGGATGCCCAGAAGATGGGCAAGAAGTGGCACATGCTCGCCAACAACTACTCGTGGCCCCAGATGTTCGAGCGCGCGTACTCGCTGGTGGCCAAGCAGGTCGGCGCGGAGTGGACGGGGGTGACGTGGGCGCCGCTCGGCACCCGCGACTTCCTGCCCTTCCTGCCCAAGGTGGCCGCGGCCAAGGCGGACGTCGTCTTCATCACCACGTGGGCCGCCGACCAGGTGGCGTGCGCCAAGCAGGTGCAGGAGTTCGGGCTGGGCAAGCAGGCGCGGGTCATTCACTCCATCACCGAGCTCACGTTCGCGGAGGCCGCCGGCGCGGGCGTCTACGACAACTCCTACTCCGGGATGCCGTGGTACTGGCACCTGAAGGACAAGTTCCCGGCGGCCAAGCGCTACTACGACCGGCACTTTGCGCTCCGCAAGCGCGCCCCCTCCGGCTACACCGCGTCGACCTATTCCACGGTGCGCCTGCTGCTCGAGACCGCGAACGAGGTCAAGTCGCTCGAGACCGACAAGGTCACCCGCGCCCTCGAGGGCCGGAAGTTCCAGCACCTCAAGGGCCCCGAGCAGATCCGGGCCTGCGACCACGTCAATCTGCAGGAGGTCTACCTCTGCAAGGGCAAGCCCGCCGGCGCGATGAAGGACGCGTGGGACTTCTTCGACATCGTGCAGAGCGTGGGCGGCGAGACGACCTCCGAGTCGTGCGAGGGTGAAGGCTTCGACCCGAAGAAGCCCCTGAGTCAGCAGATCTGA
PROTEIN sequence
Length: 420
MSPTTRRTMLKTLAGAGAVSAVSGFPFVNRLALGQQAIKVGVVVPMTGPMALEAQEMLTATQIAVEDVNAAGGVMGRKVETVIRDSEFKPEVAKRKATELIEVEKAAFLVGAIVGFEGIAMAEVGCKNDVIVSFFGQNFLTIKGKMCKYQFGNNLTPYQTAAAAAHFVDAQKMGKKWHMLANNYSWPQMFERAYSLVAKQVGAEWTGVTWAPLGTRDFLPFLPKVAAAKADVVFITTWAADQVACAKQVQEFGLGKQARVIHSITELTFAEAAGAGVYDNSYSGMPWYWHLKDKFPAAKRYYDRHFALRKRAPSGYTASTYSTVRLLLETANEVKSLETDKVTRALEGRKFQHLKGPEQIRACDHVNLQEVYLCKGKPAGAMKDAWDFFDIVQSVGGETTSESCEGEGFDPKKPLSQQI*