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PLM1_60_coex_sep16_scaffold_3854_4

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2072..2638

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 146
  • Evalue 1.60e-32
rpoE; RNA polymerase sigma-70 factor, sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 146
  • Evalue 4.50e-33
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 171.0
  • Bit_score: 148
  • Evalue 7.60e-33

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Taxonomy

R_Rokubacteria_69_13 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGAGCGAGGCCTATGATCACGGCATGGCGAGATGGGGGCGGGCCGACGCGGGCGGGCTCGGGCGCGAGGCCCTGGCCTACGCGGACACGCTCTACAACCTTGCCCGGTACCTCACCCGCAGCCCGACCGATGCGGAAGACCTCGTGCAGGAGACCTACGCGCGCGCCCTCACCTCGGCGCACCAGTACACACCGGGGACCAATCTCAAGGCCTGGCTCTTCCGCATCCTACGCAACACGTTCCTCAGCCAGTACCGCCACGAGCGGCACAACCCCACGGTGGGCGGGCTCGACACGGTGGCGCCCACCGCGCAGGGCGTGGAGCCGGTGCAGTGGCTCCGGGACGATCTCGAGCTGGACCGGCTGCGGAAGGTGGTCGGCGAGGAGATCGAGCGCGCGCTCATGACTCTCAGCGAGGAGGCGCGCACCGTGATCCTGCTGGACCTCGAGGGGTTGACCGAGGTCGAGGTCGCCCTGGTCGTGGGCTGCCCGATCGGGACCGTGAAGTCCCGGCTGTCGCGGGCGCGCGCGGCGCTGCGCGCGCTGCTCAAGGACTACGCGCGATGA
PROTEIN sequence
Length: 189
VSEAYDHGMARWGRADAGGLGREALAYADTLYNLARYLTRSPTDAEDLVQETYARALTSAHQYTPGTNLKAWLFRILRNTFLSQYRHERHNPTVGGLDTVAPTAQGVEPVQWLRDDLELDRLRKVVGEEIERALMTLSEEARTVILLDLEGLTEVEVALVVGCPIGTVKSRLSRARAALRALLKDYAR*