ggKbase home page

PLM1_60_coex_sep16_scaffold_5650_2

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(321..1673)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RG80_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 449.0
  • Bit_score: 365
  • Evalue 6.80e-98
Sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 449.0
  • Bit_score: 365
  • Evalue 1.90e-98
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:CCO25220.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio hydrothermalis AM13 = DSM 14728.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 449.0
  • Bit_score: 365
  • Evalue 9.50e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio hydrothermalis → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGACCAAGGTGGTGATTGTCGGCGCGGGCAAGGGCGGGCGCGCCCTGCTCGAGATGTTCAGCGGCGATCCCACCGTCACCATCATCGGGGTCGCCGACGTGAACCCTTGGGCCCCGGGGCTCGAGCTGGCCCGGCGCCTCAACGTCGCGGTCAGCACCGACCTGCGCGAGCTGGTCGCGGATCCGCGGGTCGACCTCATCATCGACGTGACCGGCAACGGCCAGGTGCAGGAGACCATCGAGCGGCTCAAGCCGCCGGGCACCGAAGTGATGGGGGGCGCGAGCGCCAAGTTCATGTGGGACCTCCTCGCCGAGCGGAAGCGCAGCGAGGAGCTGGAGGACCGGTACTCGCTCATGCTCCGGGAGCTGCAGGCCAAGGCCGAGGGCGACTTCATCATCGGGCAGAACCCGAAGATGCGGGAGCTGGCCGAGCAGATGATCCGGGTGGCTCAGACCCCCACCACCGTGCTGATCCGCGGGGAATCCGGTACCGGCAAGGAGCTGGTGGCGCGGGCGATCCACCGCTACTCGAATCTGCGCGACAAGCCGCTCGTCACCGTCAACTGCACCGCGCTGACTCCGACCCTGATGGAGTCGGAGCTGTTCGGGCACAAGCGCGGGTCGTTCACCGGGGCGGTGGCCGACAAGGTGGGTCTCTTCGAGAAGGCGGACGGCGCGACCATCTTCCTCGACGAGATCGGGGACATGCCGCTCGAGATGCAGGGCAAGCTGCTGCGGGTGCTGCAGGCGGGGGAGGTGAAGCCGGTCGGCGACGTGGTCACCCGGAAGGTCCGCGTGCGGGTGATCGCGGCCACCAACCGGGATCTCGAGAAGGCGCTGGCCGGCTCCGAGTTCCGCGAGGACCTGTTCTACCGGTTCAACGCCTTCACCGTGGTCCTCCCCCCGCTGCGCGAGCGCAGCGAGGACATCCCGGTCCTGGCCTACCACTTCCTCCGCAAGGCCGAGGCCAAGGTGAACAAGAAGGTGGATCGCTTCTCCCAGGACGCCCTCGACATGCTGAGGCGCTATACCTGGCCCGGCAACCTGCGCGAGCTGGAGAACATCATCGAGCGGGCCGTGGTCCTCTCCTCGAGCCAGCAGGTCGAGGTCGCGCTCCTGCCCCTCTATCTCCAGGAGTCGGGCCCGATCCGGGTCACCACCCAGGAGGGCTTCGTGCAGGCCAAGGAGCGGGTGGTCTCCATGTTCGAGAAGGAAGCTGTCGCCCGATTCCTGTCGGAGGCCCGTGGCAATATCTCGGTGGCCGCTCAGAAGGCCGGCATCACCCGGCGCAACTTCCACCGTCTGATATCCAAGTACTCGATAAATACAAAGAAATTCAAGTCTGAGTTGTAG
PROTEIN sequence
Length: 451
MTKVVIVGAGKGGRALLEMFSGDPTVTIIGVADVNPWAPGLELARRLNVAVSTDLRELVADPRVDLIIDVTGNGQVQETIERLKPPGTEVMGGASAKFMWDLLAERKRSEELEDRYSLMLRELQAKAEGDFIIGQNPKMRELAEQMIRVAQTPTTVLIRGESGTGKELVARAIHRYSNLRDKPLVTVNCTALTPTLMESELFGHKRGSFTGAVADKVGLFEKADGATIFLDEIGDMPLEMQGKLLRVLQAGEVKPVGDVVTRKVRVRVIAATNRDLEKALAGSEFREDLFYRFNAFTVVLPPLRERSEDIPVLAYHFLRKAEAKVNKKVDRFSQDALDMLRRYTWPGNLRELENIIERAVVLSSSQQVEVALLPLYLQESGPIRVTTQEGFVQAKERVVSMFEKEAVARFLSEARGNISVAAQKAGITRRNFHRLISKYSINTKKFKSEL*