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PLM1_60_coex_sep16_scaffold_13248_6

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3608..3844)

Top 3 Functional Annotations

Value Algorithm Source
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:EYR80279.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EYR80279.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 76.0
  • Bit_score: 81
  • Evalue 4.70e-13
sn-glycerol-3-phosphate import ATP-binding protein UgpC Tax=Shinella zoogloeoides DD12 RepID=V5CF87_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 76.0
  • Bit_score: 81
  • Evalue 3.40e-13
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 65.0
  • Bit_score: 63
  • Evalue 2.10e-08

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGATCTCCAGGGGCGTCGGCGCGAGCGTCAGGAGCGTGGAGTATCTCGGCGCCGATTCGATCTTGACCTGCGCGGTCGGAAGCCAGACCCTCGCGGTGCGGGCGCCGGGGCGGGTCACGCTGTCCCCGGGCGCGCCCGTCCGGCTCTCGTGGAGCCCGGACGCCACGCACGTGTTCGATGCCCAGAGTGGGAGCCGTCGGGACGACGCTCCCGCCGTTCCATCCATCTCTCGATGA
PROTEIN sequence
Length: 79
MISRGVGASVRSVEYLGADSILTCAVGSQTLAVRAPGRVTLSPGAPVRLSWSPDATHVFDAQSGSRRDDAPAVPSISR*