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PLM1_60_coex_sep16_scaffold_13022_5

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2130..4136

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 512.0
  • Bit_score: 810
  • Evalue 9.00e-232
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 516.0
  • Bit_score: 534
  • Evalue 3.50e-149
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 507.0
  • Bit_score: 830
  • Evalue 1.20e-237

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2007
ATGGCGCGCAACATCGAGTGCGGGCGCCGGGTCCGCAAGGACTTCGGTAAGATCCCGTCCGTCGTCGAGATCCCGAACCTCATCGAGATCCAGCAGCAGTCCTACGAGCAGTTCTTGCAGAAGGAGATCGCGCCCGAGCGGCGCGACGAGACGGGGCTGCAGGCGGTCTTCAAGTCGGTGTTCCCGATCCAGGACTACAACGGGAACGCCATGCTCGAGTTCCACAGCTACCACTTCGGCGATCCCAAGTACACGGTGGAGGAGTGCCACGACCGGGGCATGACCTTCGCGATCCCGCTGAAGGTCACGCTGCGGCTCAAGGTCATCGACAACGACAAGGAAGCCAAGACCCAGACCGTGCGCGAGGTGCGGGAGCAGGAGGTGTACCTGGGCGAGCTCCCGCTCATGACCGAGAAGGGCACCTTCATCATCAACGGGACCGAGCGGGTGGTCGTCTCGCAGCTCCAGCGCTCGGCGGGTGTGTTCTTCGACGACGACAAGGGCAAGACGGTCGCCTCGGGCAAGCTGCTCTTCTCGGCCCGGGTGATCCCCTACCGTGGCTCGTGGGTGGAGTTCGAGTTCGACGCCAACGACATCCTCTACGTGCGGGTGGACCGGCGGCGCAAGATGCTCGCCACCGCCTTCCTGCGCGCCTTCTGGTTCCTCGAGAAGGGCGTGATCCTCTCCGACGAGGAGATCCTCGGCCAGTTCTACGAGGCGGAGGAGGTGCTCTCCTTCGAGGACCGGATGGCCTGGGTGAAGCTCTCCCCCGAGGTCCACAACGCGGCCAAGGTCGGCGACGACGTGAAGGCGCCCCGCGCCAAGGAGCCGATCGTCCAGGCGGGCAAGACGCTGAACCCGAAGATCATCGAGAAGCTGGTCGAGGCCGGCATCACCAAGATCCCGGTCAGGGCGGAGTCGCTGGTGGGCCGCCGGACCGGCGGTCGCGTGGTGGATGCCGAGACCGGCGAGGTCCTGGTCGAGACGAACCAGGAGATCACCGCCACGCTCCTGGCCCAGATCATGGGCCGGCGGGTGGCCCCCTTCAAGCTGCTCGCGATGGTGCCGGGCAAGACGGACGGCTCGCTGTACGAGACGCTCTCGCGCGATCACTTCAAGAACCCGGACGAGGCCCTCGTGGAGATCTACCGGCGGCTGCGCCCGGGGGATCCGCCCACCGTGGAGTCGGCGCGTGCCCTCTTCCGCGGGATGTTCATCGATCCGCGCCGCTACGACCTGGCCCGCGTCGGGCGCTTCATGATCAACAAGAAGCTCGGCATCGGGGCCAACCTCAACATCAAGACCCTCCGCAGCGAGGACGTGGTCTACGTGGTGCGGCACCTCTTCCAGGTCAAGCTCGGGAGCAAGTCGACCGACGACATCGACCACCTCGGCAACCGGCGCGTCCGCTCGGTGGGCGAGCTGCTCGAGAACCAGTTCCGGGTGGGCCTCACCCGCATGGAGCGCGCGGTCAAGGAGCGGATGTCGATCTCCGACATCACCAACCTGATGCCGCACGATGGACCAGACGAACCCCCTGGCCGAGCTGACCCACAAGCGCCGGCTCTCCGCGCTGGGCCCGCGCGGCCTGTCGCGGGAGCGGGCCGGATTCGAAGTGCGCGACGTGCACCCGACTCACTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAGCTCGCTCAGCACCTACGCGCGCATCAACGAGTTCGGCTTCATCGAGACGCCGTATCGGAAGGTGGAGAAGGGCAGCGTGCTGCCCGGCGACCCGGTCTACCTCACCGCGCTCGAGGAAGAGCGCTACGTCATCGCGCAGGCCAACGCGTCGATGAACGAGCACGGCCGTTTCATGCAGGACCGGGTGTCGGCCCGGAAGGGCGGCGAGTACAAGATGGTGGCCCCGGACGAGATTCACTTCATCGACATCTCACCCAAGCAGCTCGTCTCGGTGGCGGCGGCGATGGTGCCGTTCCTCGAGAACGACGACGC
PROTEIN sequence
Length: 669
MARNIECGRRVRKDFGKIPSVVEIPNLIEIQQQSYEQFLQKEIAPERRDETGLQAVFKSVFPIQDYNGNAMLEFHSYHFGDPKYTVEECHDRGMTFAIPLKVTLRLKVIDNDKEAKTQTVREVREQEVYLGELPLMTEKGTFIINGTERVVVSQLQRSAGVFFDDDKGKTVASGKLLFSARVIPYRGSWVEFEFDANDILYVRVDRRRKMLATAFLRAFWFLEKGVILSDEEILGQFYEAEEVLSFEDRMAWVKLSPEVHNAAKVGDDVKAPRAKEPIVQAGKTLNPKIIEKLVEAGITKIPVRAESLVGRRTGGRVVDAETGEVLVETNQEITATLLAQIMGRRVAPFKLLAMVPGKTDGSLYETLSRDHFKNPDEALVEIYRRLRPGDPPTVESARALFRGMFIDPRRYDLARVGRFMINKKLGIGANLNIKTLRSEDVVYVVRHLFQVKLGSKSTDDIDHLGNRRVRSVGELLENQFRVGLTRMERAVKERMSISDITNLMPHDGPDEPPGRADPQAPALRAGPARPVAGAGRIRSARRAPDSLRPHLPDRDAGRPEHRPDQLAQHLRAHQRVRLHRDAVSEGGEGQRAARRPGLPHRARGRALRHRAGQRVDERARPFHAGPGVGPEGRRVQDGGPGRDSLHRHLTQAARLGGGGDGAVPRERRR