ggKbase home page

PLM1_60_coex_sep16_scaffold_20524_4

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1905..2753)

Top 3 Functional Annotations

Value Algorithm Source
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 280.0
  • Bit_score: 428
  • Evalue 4.10e-117
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 282.0
  • Bit_score: 348
  • Evalue 1.50e-93
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 280.0
  • Bit_score: 433
  • Evalue 1.80e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGAAGCTCGTACGGTACGGCCGGGCGGGCGCCGAGAAGCCCGGATTGATCGACGCGGACGGGACCCTACGCGATCTCTCTCGGATCATCCGGGACATCACCCCGGAGGCGCTCACGCCCGCCGGGCTCAAGCGCCTGCGCGCCGCGAAGCCTTCGCTCATGCCCGCGGTCAAGGGCAAGCCCCGGCTCGGCTGCCCACTGGCCGGCATCGGCAAGATCGTCTGCATCGGCCTCAACTACACCGATCACGCGGAAGAGGTGAAGATGGCGCTGCCGAAGGAGCCCACGATCTTCATCAAGGCCAACAGCGCGATCAGCGGGCCGGGCGATCCGATCGCGCGGCCGCGCGGGGCCGTGAAGCTCGACTATGAAGTCGAGCTGGTGGCGGTGATCGGCCGCGCCGCGCTCCACGTCGAGGAGGGCAGCGCGCTGCGCTACGTGGCCGCCTACTGCCTGATGAACGACGTCTCCGAGCGGGAGTTCCAGATGGAGCACGGGGGCGGGACCACCAAGGGCAAGAGCTGCGACACCTTCGCGCCCATCGGGCCCTGGCTGGTCACCGCGGACGAGATCGCCGACCCGCAGGCGCTCGGCCTGTGGACCACCGTCAACGGCGAGCGGCGCCAGCAGGGCAGCACCCGGGACATGGTCTTCCCGGTGCGCCAGCTCGTCTCCTACGTGAGCCGCTTCATGTCGCTCCAGCCGGGCGATCTGCTCTCCACCGGCACGCCCGCCGGGGTGGGCCACGGGGCCCGGCCGCCGCGCTATCTCGACGACGGCGACGCGGTGGCCATGGGGATCGACGGCCTCGGAACCCAGCAGCACCGGGTGGTCGCCCGGCGCTTGTGA
PROTEIN sequence
Length: 283
MKLVRYGRAGAEKPGLIDADGTLRDLSRIIRDITPEALTPAGLKRLRAAKPSLMPAVKGKPRLGCPLAGIGKIVCIGLNYTDHAEEVKMALPKEPTIFIKANSAISGPGDPIARPRGAVKLDYEVELVAVIGRAALHVEEGSALRYVAAYCLMNDVSEREFQMEHGGGTTKGKSCDTFAPIGPWLVTADEIADPQALGLWTTVNGERRQQGSTRDMVFPVRQLVSYVSRFMSLQPGDLLSTGTPAGVGHGARPPRYLDDGDAVAMGIDGLGTQQHRVVARRL*