ggKbase home page

PLM1_60_coex_sep16_scaffold_24357_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1785..2225)

Top 3 Functional Annotations

Value Algorithm Source
TolR protein bin=GWF2_Methylomirabilis_70_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 146.0
  • Bit_score: 214
  • Evalue 4.80e-53
exbD; Biopolymer transport protein exbD similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 134.0
  • Bit_score: 139
  • Evalue 5.50e-31
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 146.0
  • Bit_score: 214
  • Evalue 6.70e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGGCCATTAGGGTCGACACGCCCGACTACGGCAGCGGCGGCGGCTACCGCATCGGTGGGACCATGTCCGAGATCAACATCATCCCGCTGGTGGATGTCATCCTCGTGCTCCTCCTCATCTTAATGCTCACCGCGCCGCTCATGTACCGCGGCATCGACGTCAATCTGCCCAAGAGCTCGGGCAAGCCCAGCGCGGTCGAGGAGCGGGTGGTGCTGACGGTGACGAAGGAGCAGACCATCTACATCAACGACAAGCCGGTGGCCCTGGGCGCGGTCGAGCAGGCGCTGCGCGACCTGTTCAAGAACCGGCAGGACAAGACGATCTACCTGCGGGCGGACCAGGCCCTGCAGTACGGCCTCGTGGTGGAGACCATGGATCGCGTGCGCCGCGCCGGCATCGAGAAGCTCGGCATGGTGACGGAGCCGATCCGCGCTCGATGA
PROTEIN sequence
Length: 147
MAIRVDTPDYGSGGGYRIGGTMSEINIIPLVDVILVLLLILMLTAPLMYRGIDVNLPKSSGKPSAVEERVVLTVTKEQTIYINDKPVALGAVEQALRDLFKNRQDKTIYLRADQALQYGLVVETMDRVRRAGIEKLGMVTEPIRAR*