ggKbase home page

PLM1_60_coex_sep16_scaffold_30617_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1589..2596)

Top 3 Functional Annotations

Value Algorithm Source
Putative TIM-barrel fold metal-dependent hydrolase bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 268.0
  • Bit_score: 369
  • Evalue 3.50e-99
aminocarboxymuconate-semialdehyde decarboxylase similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 340.0
  • Bit_score: 333
  • Evalue 4.60e-89
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 333.0
  • Bit_score: 472
  • Evalue 3.10e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_68_19 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1008
CCCGTGGCAGCGCCCTTCGGTATCGACGTGCACGCGCATTTCTTCCCCGAGCGCTTCTTCCGCGCCATCGAGGCCGGCGGCGCGCCGTCCGGTGGGCGCATCGACCGCTCGAGCCCGGCCGGGCCCGCCATCGACGTGAAGGGCTCGCGCACGCCGCCGCTCGAGGCGCGCTACTACGACCTGCCGAAGCGCGTGGCCTCCATGGACAAGCAGGGGGTGGCCGTCCAGGCGCTCTCGCTCACCGCGCCGATGGTCTACTGGGCCCAGGGCGACTTCGGCGCGCGCCTGGCGCGCGAGTGGAACGACGGCGCCAGCGCCGCGCACACCGCCTATCCCGACCGCTTCGTGGTCTGCGCCACGCTGCCGATGCAGGACACGGCGCAGGCGCTGGCCGAGCTGGATCGCGCGGCGCGCCTGCCCGGGGTGCGCGCGGTCTACATGGGCACCAATGTCAACGGACGCAACCTCTCCGATCCCGCGTTCTTCCCGGTGTTCGAGCGCTGCCAGGCGCTGGGGCTGCCGGTGGGACTCCACCCGTTCAACGTGAACGGGGCGGAGCGGCTCAAGCCCTACTACCTGACGAACCTGCTCGGCAACCCGTACGACACCGGCATCGCGGCGGCCCACCTCATCTTCGGGGGCGTGCTGGATCGGCTGCCGAAGCTGCAGGTGATCCTGCCGCACGCGGGCGGCACGTTCCCGCTGGTGTGGGGGCGGCTCCAGCGCGGCCAGAAGGTCCGGCCGGAGGCGAACAAGGCCGCGAAGAAGCCGGTGAAGGCCTACCTGCGCCGGTTCACCTACGACACCATCAGCCACGATGCGGGCGCGCTGCGGTATCTCATCGACACGGTGGGCGCGGACCGGGTGATGCTCGGCACCGATTTCTGCTTCGACATGGGCTACGACCGTCCCCTCGACATCATCCGCGACAAAGCGGTCAAGCTCTCGCGGGCCGATCAGGGCAAGGTCGTGCGCGAGAACGCCGCCCGACTGCTGCGCCTCCGCTGA
PROTEIN sequence
Length: 336
PVAAPFGIDVHAHFFPERFFRAIEAGGAPSGGRIDRSSPAGPAIDVKGSRTPPLEARYYDLPKRVASMDKQGVAVQALSLTAPMVYWAQGDFGARLAREWNDGASAAHTAYPDRFVVCATLPMQDTAQALAELDRAARLPGVRAVYMGTNVNGRNLSDPAFFPVFERCQALGLPVGLHPFNVNGAERLKPYYLTNLLGNPYDTGIAAAHLIFGGVLDRLPKLQVILPHAGGTFPLVWGRLQRGQKVRPEANKAAKKPVKAYLRRFTYDTISHDAGALRYLIDTVGADRVMLGTDFCFDMGYDRPLDIIRDKAVKLSRADQGKVVRENAARLLRLR*