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PLM1_60_coex_sep16_scaffold_31820_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3055..3822)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=Pseudomonas sp. 313 RepID=UPI0003742F99 similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 197.0
  • Bit_score: 185
  • Evalue 5.40e-44
cmpR; LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 214.0
  • Bit_score: 184
  • Evalue 2.60e-44
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 198.0
  • Bit_score: 218
  • Evalue 8.10e-54

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 768
ACCGGCGCCACCGCCAGCATCCACCTGCTGCCGCCGCTCCTGGGACGGATGCGGGCGCGCTATCCGGAGCTCGAGCTCATCGTGGTGACGGGCAACGCCCCCGAGATCGCCGCCGCCGTCTCCGCCAACGAGCTGGACGTGGCCCTCGTGACCCTGCCGGTCACCGGCCGTCAGCTCCTGGTGACGCCGCTCTTGCTCGACCCGCTGGTGGCGGTGGGCCCGCCCTCCCAGGCGTGGCCGGGGCGCGGGGCGCTCACCGCGGCCGAGCTGGCGCGCCATCCGCTCATCGTCTACGAGCGCGGCGGGACCATCCGGCGCGTGATCGACGGGTGGTTCCGACGCGGGGGGGTACGGCCGCGAATCGTGATGGAGCTGGGCAACGAGGAGGCCATCAAGAAGCTGGTGGGCGCCGGCCTCGGCGTCTCGGTGAGCCCGGCCATGGCGGTGCGGGACGAGGTGCGCTCGGGCGCGCTCTCCATGCGGCCGCTCTCGCCCGCCCTGGGGCGCCGCCTCGGCCTCGTGCGGCGGCGCGACAAGCCCGAGACCCCAGCGCTCCGCGCATTCCTCGCCGCCCTCGAAGGGTTGCCTAGGGGCAGTGGCTTGGCGAGGTGCAGCCCTAGCAGTGGGAGCCGCAGCCGAAGGCGAGGCGACCGATCAGATGACGAGCGCGAAGCGCGCCGAGCCGAGCGGATCAATGGAAGTCGTGGGAAGGCACGCTCGCCAGGCGGTGGCGCAGCGGGGCGAGCCGCTCGGCGCGCACCGAGGTGA
PROTEIN sequence
Length: 256
TGATASIHLLPPLLGRMRARYPELELIVVTGNAPEIAAAVSANELDVALVTLPVTGRQLLVTPLLLDPLVAVGPPSQAWPGRGALTAAELARHPLIVYERGGTIRRVIDGWFRRGGVRPRIVMELGNEEAIKKLVGAGLGVSVSPAMAVRDEVRSGALSMRPLSPALGRRLGLVRRRDKPETPALRAFLAALEGLPRGSGLARCSPSSGSRSRRRGDRSDDEREARRAERINGSRGKARSPGGGAAGRAARRAPR*