ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3059_1

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(181..1395)

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding LysM:Lytic transglycosylase, catalytic bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 349.0
  • Bit_score: 369
  • Evalue 2.50e-99
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 400.0
  • Bit_score: 218
  • Evalue 2.60e-54
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 394.0
  • Bit_score: 389
  • Evalue 5.50e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGACGCGATTGACGTATAAAGCTATTCACTATCTGCTCGTTGTCCTACTCTGGTCATTTGCTCTGGCCCCTGCCGGCATCGCTCACGCCCAGCGGTCGGCATTTCCAGTGTCCGCGGGACTTGAAGACGCCGTGCGATTCTGGAAGCAGATATTCACGCGATACAGTTCGTCTCAGGTGGTGCTCTTCGATCCGTTGGACCCAGGCAAGATCTATACGGTCATGCGCGCGCCCGACGGCGAACAGGGACAGTCTCTGGTCGAAAAAGAACGAACCCGCGTCGCCGCCGACTACGACCTTGCCGACGATGAGAGCCGGGTCAGAAGCCAGCGCGGCGCCAAAGAACGGTTTCTTGAAGGGCTGAAAATTTCCGGGCGCTACATGACGCAGATGCAAAAGATTTTTCGCGAAGAGGGCCTGCCCGTGGAGCTCGCGTATCTGCCTCTCGTCGAGTCTTCGTTCAACGTCCGCGCGCGCTCAAGTGCCGGCGCTGTGGGTATGTGGCAGTTCATGCCCGAGACCGGAAAGAAATTCATGCGTGTCGATACGGCGGTCGACGAGCGGCGCGATCCGATGGCGTCGACCAGGGCGGCGGCGCGGCTGTTAAAAGAAAACTATCGCATTCTAGGCAACTGGCCGCTGGCGATCACTGCTTATAATCACGGCACCGAAGGAATTTTTCGCGGCATTAAAGCTGTCGAATCTGACGATCTGATAGATCTCATCCGCGGCTATCAATCGCCCATGTTCGGTTTTGCCTCGAAGAATTTTTACGCTGAATTCCTCGCCGTGGTCGAAATCGCGACCAACAGCGATGGTTATTTTCCGTTTCTGCGGCCCCATCGACCGTTTACATTGCACGAGGTGGCGGTGCAGCGGCAGACGCCGCTTCATGCCGTGCTCAAACCGGCGGCGATTTCCCAGCGTGATTTCTTCGAATGGAATCCGGCGCTTCAGCCGACGGCGAAAGTCATTCCGACCGGCTATCGGGTGAAGTTGCCGCCGCATAGAGTCGATGCTTTTGTCTCGGCGCAAAAGCGTGCCGGCGCTGCGGCACCAGCAGCGAAGACAGCGTCAGCCGCGAAAGCCGGCGCCGAGCGTGGCAAGAGCACCAAGGCCACGGTCAAAAACCGGGGCAGCGTGACCGCTAGGGCCAAGTCCTCGACGAAACTGGTTTCCCGGGGAAAGAACCGCGCAGCGGCGTCGAACTCGTAA
PROTEIN sequence
Length: 405
MTRLTYKAIHYLLVVLLWSFALAPAGIAHAQRSAFPVSAGLEDAVRFWKQIFTRYSSSQVVLFDPLDPGKIYTVMRAPDGEQGQSLVEKERTRVAADYDLADDESRVRSQRGAKERFLEGLKISGRYMTQMQKIFREEGLPVELAYLPLVESSFNVRARSSAGAVGMWQFMPETGKKFMRVDTAVDERRDPMASTRAAARLLKENYRILGNWPLAITAYNHGTEGIFRGIKAVESDDLIDLIRGYQSPMFGFASKNFYAEFLAVVEIATNSDGYFPFLRPHRPFTLHEVAVQRQTPLHAVLKPAAISQRDFFEWNPALQPTAKVIPTGYRVKLPPHRVDAFVSAQKRAGAAAPAAKTASAAKAGAERGKSTKATVKNRGSVTARAKSSTKLVSRGKNRAAASNS*