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PLM4_65_b1_redo_sep16_scaffold_72859_4

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 1305..2531

Top 3 Functional Annotations

Value Algorithm Source
Putative transcription regulator containing HTH domain Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RNK1_SYNP3 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 396.0
  • Bit_score: 418
  • Evalue 4.70e-114
Helix-turn-helix motif {ECO:0000313|EMBL:KGA93423.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 406.0
  • Bit_score: 641
  • Evalue 6.20e-181
putative transcription regulator containing HTH domain similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 396.0
  • Bit_score: 418
  • Evalue 1.30e-114

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Taxonomy

Leptospirillum ferriphilum → Leptospirillum → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1227
ATGAGCAATATTCGAGCAATTCGAAGCGAGGCAGATTACGAGGCCGCTATCGCGCGTATCGATGACCTTATGGACGCCGAGGGTGGTACCCCTGAGGGTGAGGAACTCGATGTGCTTACTGACCTTGTCGAACTTTACGAGGCGAAGCATGTCCCCATGGGTCTTCCGAGCCCGCTTGGAGCAATCCAGTTTCGCATGGAGCAAGGCGGGCTTTCACCGCGTGATCTTATCCCGTTCATGGGCAGCCGTGCCAAAGTATCCGAGGTGCTGTCCGGCAAGCGCCCGCTCACAATGCAAATGGCGCGCGCGCTGCATGCCAATCTCGGTGTCCCCGCTGACGTGCTGTTACAGCAACCGGGCGGTGAGTTGCATTCAGCGCTCGAAGGTACCAATTGGCACCGGTTTCCATTGGCGGAAATGGCAAAACGTGGGTGGATCGAGAAGCGACGCAATTTTGCCTCCCATGCCGAAGAAATCATGCGCGACCTGATTCGTCGGGCCGGAGGCGAATATGTTTTGCCCGCAGCATTCTTCCGGAAGAATGATCAGGCGCGTGTCAACGCGAAAACTGACCCATACTCTCTCAAGGCTTGGTGCTGGGAAGTGTTAGCGAGGGCAAATGCGCATCGGCTGCCTGTCGGCTTCAAACCGGGTACGGTCGATCTCTCTTTTCTGCGAAAAGTGGCAATGTTGAGCTGGTCGCAAGACGGCCCCCGACTCGCTCAAGAGTTCCTCGCTAATCACGGTATTCATCTCGTGTATCTTGAGCATTTACCGCGTACGCACCTCGACGGTGCGGCGCTTCAACTCGCCGACGGTACACCCGTTATCGGGCTGACCTTGCGCTATGATCGGCTCGATAACTTCTGGTTCTGCTTGCTGCATGAGCTTGCTCATATCGGCCGCCATATGAGCGGGACGAGCAATGAAGCGTTCGTCGATGATCTGAGTCTTCGTGGCGTGCAAGGCGCGCGACGTGATCCGAGAGAAGCCGAAGCGGATGAATGGGCCGAGAATGGGTCCATTCCAGAAGACATATGGAATACGAGCAAGGTAAAGGACAACTCAACGCCGCTGGCCGTCATGGAGCTAGCGCAGCGCCTCGGCATTCATCCGGCAATCATCGCAGGTCGCATCCGATACGAGACACGGAACTTTCGCCTGTTGTCCCATTTTGTCGGCACCGGCACGTTACGTAAGCAGATTTTTAAAGAAGAAGAGCGATGA
PROTEIN sequence
Length: 409
MSNIRAIRSEADYEAAIARIDDLMDAEGGTPEGEELDVLTDLVELYEAKHVPMGLPSPLGAIQFRMEQGGLSPRDLIPFMGSRAKVSEVLSGKRPLTMQMARALHANLGVPADVLLQQPGGELHSALEGTNWHRFPLAEMAKRGWIEKRRNFASHAEEIMRDLIRRAGGEYVLPAAFFRKNDQARVNAKTDPYSLKAWCWEVLARANAHRLPVGFKPGTVDLSFLRKVAMLSWSQDGPRLAQEFLANHGIHLVYLEHLPRTHLDGAALQLADGTPVIGLTLRYDRLDNFWFCLLHELAHIGRHMSGTSNEAFVDDLSLRGVQGARRDPREAEADEWAENGSIPEDIWNTSKVKDNSTPLAVMELAQRLGIHPAIIAGRIRYETRNFRLLSHFVGTGTLRKQIFKEEER*