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PLM4_65_b1_redo_sep16_scaffold_23562

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_23562_1
RLO_PLX_64_10, Bacteria

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comp(3..2138)
-----------------
DNA (2136bp)
protein (712aa)
Signal transduction histidine kinase, LytS bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
sensor protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_23562_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2220..2663)
-----------------
DNA (444bp)
protein (148aa)
Glr1374 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKV2_GLOVI
SUF system FeS assembly protein, NifU family
Tax=GWA2_Rhodocyclales_65_20_curated
PLM4_65_b1_redo_sep16_scaffold_23562_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2660..3925)
-----------------
DNA (1266bp)
protein (422aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Cysteine desulfurase / L-selenocysteine selenide-lyase (L-alanine-forming) Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IP93_ANADE
SufS subfamily cysteine desulfurase
PLM4_65_b1_redo_sep16_scaffold_23562_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3951..5306)
-----------------
DNA (1356bp)
protein (452aa)
SufD, needed for fhuF Fe-S center production/stability bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iron ABC transporter permease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM4_65_b1_redo_sep16_scaffold_23562_5
R_NC10_66_22, NC10, Bacteria

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comp(5320..6087)
-----------------
DNA (768bp)
protein (256aa)
transporter Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003779749
transporter
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 5 items

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