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PLM4_65_b1_redo_sep16_scaffold_2896_22

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: comp(21864..23339)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 506.0
  • Bit_score: 594
  • Evalue 9.80e-167
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 498.0
  • Bit_score: 625
  • Evalue 1.10e-176
Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 494.0
  • Bit_score: 627
  • Evalue 1.10e-176

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGAAGCAGGGCCTGCAGCAGACCACGTCACTCCGCCAGGAGCTGCGGATGAATCCTCGCCTGTACCAGGCGATGGATCTCCTCTACATGCCCCTGCTCGACCTCCAGCAGCACCTGAAACAGGAGTTGCTCGTCAATCCCTTCCTCGAGCTGATCGAGCCCGAGGACGACGAGCTGCCCGCGGCCGAAACCGCGGAGCCGGAGGTCAAGGAAGAGAAGAAGGACGAAGAAACCGACTGGGAGGAGATCATCCTGGACGGGTTCCAGGTGAGTGGGTCGGGCGCGCGCGACCTCTCGGAGTCGGACGAGGTGTTCGAGCGCACGCCGGTCCAGAGCCGGGCGCTCACCGATCACCTGTGGGACCAGCTCCTGATGCTCGACCTCACCGAGCGGCAGCGCACCCTGGCCGACGAGTTCCTGGGCAACCTGGGCGACGACGGCTACCTCCAGGCGCCGCTCGAAGAGATCGTGGCCGGGGCAAATCGGTGGCTGAATGGCGCCGCGGACGGGACGGACACGACGGGCACGACGGACACGACGGACGCCGAAGCGCCCTACACGCTCGCCGAAGCCGAGCAGATGCTCCGCATCATGCAGCGGCTCGATCCGCCCGGCATCGGGGCGCGGGACCTGCGCGAGTGCCTGCTGATCCAGCTGGAGGACCAGGGCCTGCAGGAGACGCTCACCTACCGGCTGGTGCACGACGCGTTCGACGACCTGATCGGGCATCGGTGGAGCGACGTGGCCAAGCGGTACGGGATCGATCCCCGGGAGGTGCAGGACGCGGCCGACGAGCTGTCCAAGCTCGATCCCAAGCCGGGCCTCCGGTTCCTCCCCTCGGACGACGAGTACGTCACGCCGGACCTCGTGGTCGAGAAGATCGAGGGCCAGTACCGGGTGTTCCTGAACGATACCGGCATGCCGCGGCTCCGGATCTCGCGGCTCTACCAGGAGCTGGCGGCCGACAAGAAGAAGTTCACCGGGGAGACGCGCGAGTTCGTCACCGAGAAGCTGAACGGCGCCCAGTGGCTCATCCAGGCCATCGAGCAGCGCCGCCAGACGATGCTCAAGGTGATGAACTTCATCGTGGACCGGCAGCGGGAGTTCTTCGAGAAGGGCATCGAGTACCTGAAGCCGCTCACGCTGCGCGAGGTGGCCGACGTCATCAACATGCACGAGTCTACCGTGAGCCGGGTGACCAACCAGAAGTACGTGCAGACGCCCCGGGGAGTGTTCCCGCTCAAGTTCTTCTTCTCCAGCAGCCTCGAGACCACCTCCGGCGAGGACGCCAGCGCGCGCGCCGTGCGGGCCCAGATCCAGAAGCTGGTGGGCGACGAGGCGCCCGCCCGCCCGCTGACGGACGCGGAGATCGTGCAGGCCCTGCAGGACCGGGGCGTGCGCATCGCCCGCCGCACCGTGGCCAAGTACCGCGACCAGCTGGGCATCCTGCCCGCGCGCATGCGCAAGCGGATATGA
PROTEIN sequence
Length: 492
MKQGLQQTTSLRQELRMNPRLYQAMDLLYMPLLDLQQHLKQELLVNPFLELIEPEDDELPAAETAEPEVKEEKKDEETDWEEIILDGFQVSGSGARDLSESDEVFERTPVQSRALTDHLWDQLLMLDLTERQRTLADEFLGNLGDDGYLQAPLEEIVAGANRWLNGAADGTDTTGTTDTTDAEAPYTLAEAEQMLRIMQRLDPPGIGARDLRECLLIQLEDQGLQETLTYRLVHDAFDDLIGHRWSDVAKRYGIDPREVQDAADELSKLDPKPGLRFLPSDDEYVTPDLVVEKIEGQYRVFLNDTGMPRLRISRLYQELAADKKKFTGETREFVTEKLNGAQWLIQAIEQRRQTMLKVMNFIVDRQREFFEKGIEYLKPLTLREVADVINMHESTVSRVTNQKYVQTPRGVFPLKFFFSSSLETTSGEDASARAVRAQIQKLVGDEAPARPLTDAEIVQALQDRGVRIARRTVAKYRDQLGILPARMRKRI*