ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_30171_8

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(6617..8488)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter ATP-binding/permease protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 610.0
  • Bit_score: 842
  • Evalue 2.60e-241
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 602.0
  • Bit_score: 775
  • Evalue 6.50e-222
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 608.0
  • Bit_score: 868
  • Evalue 3.70e-249

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATGAGTTCGGCAGTAAGCAACAAGGAAAAGAAAACGCGTGTCTCGCCGGCAAACGCCTGGCGCGATGCGCGCGAACTTATTTACGCTCATCGTCATCGCCTGGCGTTGGGGATGTTCCTCATGATCGTTAACCGGCTTGCCGGACTTGTCCTGCCTGCCAGCTCCAAATACTTAATCGACGACGTCATTATCAAACATCGCACTGAGCTGCTCGTCCCATTGGCGTTGGCTGCAGGCACGGCGACATTGATCCAGGCGTTTGGCTCCTTTGCCCTGACGCAGGTGTTGGGCGTGGCCGCGCAGCGGGCCATCACGGAGATGCGCAAGAGCGTGCAGGAGCACGTCGCGCGTTTGCCCATTCGCTACTTTGATTCGACACAAACCGGCATCCTCATCTCCCGCATCATGACCGACGCCGAGGGTATTCGAAATCTCGTCGGCACCGGACTGGTGCAACTCGTTGGCGGTCTGGTAACGGCATTCATCGCCCTGGGCGTGCTTTTCTATTTGAACTGGCGACTAACCTCGATCACGCTGCTGGCACTCGCTGCATTCGGCAGCGCGATGGCGCTGGCCTTTAAACGGCTGCGGCCGCTCTTTCGCGAGCGTGGCCAAATTAACGCAGAAGTGACCGGCCGTCTGGCTGAGTCGCTGGGCGGCATTCGCATCGTGAAAGCCTATGCGGCCGAGAAGCGCGAGGAGCTGGTCTTCGCGCGCGGTGCTCACCGGCTGTTTCGCAACGTAGCGCGATCCATGACTGGCGTCGCCGCAGTCACTGCGTTCTCGACTGTTATCGTCGGCGTCATCGGCGTCATCCTAATCCTCGTGGGAGGACGCGCGATTCTCAACGGCCAGATGACGCTCGGCGACTTCTTCATGTACATGATCTTCACTGGACTGGTGGCCGCTCCGCTGGTTGAGATCGCTGCTATCGGCACGCAGATCACGGAAGCTTTTGCGGGTCTCGATCGCATACGCGAAATCAACCGCATGGCAACTGAAGATGCAGACGAGGCCGATCGCTTATCGCTGCCGGAGATTCGGGGTGAAGTAACTTTCGAGAACGTTAGCTTTGAGTACAACGAGAGCGTGCCGGTCCTGAAGAATGTTTCCTTCCGCGCGCTCGCCGGTTCGACTACGGCACTGGTTGGCTCGAGCGGTTCAGGCAAGTCGACCCTGATTAGTCTAGTGATGGCTTTTAATCGGCCGCTCGCAGGCATGGTGACAGTCGACGACCGGGACCTTGATTCTATTCGTTTGAAGGATTATCGCAGCCAACTCGGCGTCGTCCTGCAGGACAACTTTCTTTTCGATGGCACGATCGCGGAGAACATCGGTTTCTCTCACCCGCACGCGACGCGCGAGCAAATAATCACAGCCAGCCGCATTGCCCACTGCGAAGAGTTCATCAACGGTTTTGCCGACGGCTATGACACTGTAGTTGGCGAGCGCGGCGTGAAGTTATCTGGTGGACAACGCCAGCGAGTGGCGATTGCTCGTGCGATTCTGGCGGAGCCGAAAATTCTTATTCTCGATGAAGCTACCTCCAGTCTCGATAGCGAGAGTGAGGCGTTGATTCAGGATGGTTTGCAATCATTGCGTCGCGGGCGCACTACATTCGTCATCGCTCATCGCCTGTCAACGATTCGCAGCGCGGACCAAATTCTGGTGTTGGAAGGCGGCCAGATAGTTGAACGCGGTACGCATGAAGAGTTGCTCGCCGCTGATGGACGGTATAAGCAGTTGTACGAGAAGCAGTATCGCTTTGAAAGAAACCAGTTCATCAACCCGGGCGAGGATTTCACGCCGGAGTTACCCAAGGCCGCAACCTCGGCGCCTAATGCGGGCCCGCTATTGCCTACTAATCTGTGA
PROTEIN sequence
Length: 624
MSSAVSNKEKKTRVSPANAWRDARELIYAHRHRLALGMFLMIVNRLAGLVLPASSKYLIDDVIIKHRTELLVPLALAAGTATLIQAFGSFALTQVLGVAAQRAITEMRKSVQEHVARLPIRYFDSTQTGILISRIMTDAEGIRNLVGTGLVQLVGGLVTAFIALGVLFYLNWRLTSITLLALAAFGSAMALAFKRLRPLFRERGQINAEVTGRLAESLGGIRIVKAYAAEKREELVFARGAHRLFRNVARSMTGVAAVTAFSTVIVGVIGVILILVGGRAILNGQMTLGDFFMYMIFTGLVAAPLVEIAAIGTQITEAFAGLDRIREINRMATEDADEADRLSLPEIRGEVTFENVSFEYNESVPVLKNVSFRALAGSTTALVGSSGSGKSTLISLVMAFNRPLAGMVTVDDRDLDSIRLKDYRSQLGVVLQDNFLFDGTIAENIGFSHPHATREQIITASRIAHCEEFINGFADGYDTVVGERGVKLSGGQRQRVAIARAILAEPKILILDEATSSLDSESEALIQDGLQSLRRGRTTFVIAHRLSTIRSADQILVLEGGQIVERGTHEELLAADGRYKQLYEKQYRFERNQFINPGEDFTPELPKAATSAPNAGPLLPTNL*