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PLM4_65_b1_redo_sep16_scaffold_32046_1

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(1..4008)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 1336.0
  • Bit_score: 2348
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 1341.0
  • Bit_score: 1991
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHU9_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 1341.0
  • Bit_score: 1991
  • Evalue 0.0

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 4008
ATGTTTCGATTTCAACAAGAGAAGACGCAATTAGCTCCTGACTTTGAGGCAATTCGAATCTCGCTGGCTTCGCCGGACAAAATCCGGCAATGGTCGCATGGCGAGGTGACAAAGCCGGAGACGATCAACTACCGCACGTTTAAGCCGGAGCGTGACGGGCTTTTCTGCGCGCGCATCTTTGGTCCCGTGGCTGATTGGGAATGCCTCTGCGGCAAATATAAACGCATGAAGCATCGCGGCGTGATCTGCGACAAATGTGGCGTGGAAGTGACGCAGGCAAAGGTGCGTCGCGAGCGTTTGGGTCACATTGATTTGGCCAGTCCATGTTCGCATGTTTGGTTTTTCAAAGGACTGCCTTCGCGCATCGGCCACTTGCTCGACATTCCCCTGCGCGAGCTTGAGAAGGTTCTTTACTTCGAATCCTACATCGTCATCGATCCCGGCGATGTTCCGGGAATCAAAGAGCGAGAGCTGCTTTCAGATGAGCGCTATCGCGAGCTCGTGCGCGATTATCCAGCCCAGTTTGTCGCCAAGATGGGCGCCGAGGCGATCAAGGAATTGCTGGCGATGGTGAAGGTCGAGGAACTCTCGATTGAACTTCGCAAGCGCATGCGCGAAGAGACTTCGCAGCAGAAAAAACTTAAGTATTCGAAGCGGCTGAAGGTCGCGACCAGTTTTCTGAAGTCAGGCAACCGGCCTGAGTGGATGATTCTCGACGTCATACCGGTAATTCCGCCTGAGCTGCGCCCGCTCGTGCCGCTCGATGGCGGACGCTTCGCCACTTCCGATCTAAACGATCTCTACCGGCGCGTTATCAACCGCAACAACCGCTTGAAGAAGTTGATGGAACTTCGTGCTCCGGAAGTGATCGTGCGCAATGAAAAGCGCATGCTCCAGGAAGCGGTTGACGCGTTGTTTGATAACGGTCGCCGCGGCCGCGTGTTGCGCGGTGTAAATAACCGTCCGCTCAAGTCGTTGAGCGGAACGCTCAAGGGCAAACAGGGACGTTTTCGTCAGAACCTATTGGGTAAGCGCGTTGACTATTCCGGACGTTCGGTGATCGTTGTTGGTCCGGAGTTGAAGCTGCACCAATGTGGCCTGCCGAAGAAGATGGCGCTCGAGCTGTTTAAGCCATTCATCTATAACCAACTCGAGAAGCAGGGCCACGCCGCCACGATCAAGCAGGCGCGCGAAATGGTCGAGCGCCAGGAGCCCGTTGTCTGGGACATTCTCGAGGAAGTAATTCGCGAGCATCCCGTGCTTTTGAACCGCGCCCCAACTCTTCACCGTCTAGGTATCCAGGCGTTTGAGCCGGTGCTTGTTGAAGGCAAGGCCATCAAAATTCACCCGCTCGTGTGTACTGCGTTCAACGCAGACTTCGACGGCGACCAGATGGCCGTGCACATTCCGCTTTCACCCGAGGCGCAAATTGAAGCTGCCGTGCTGATGCTTTCGAGCAACAACATTCTCAGTCCCGCAAGCGGTCAGCCAATCGCCGTGCCTTCGCAGGATATCGTGCTCGGTATTTACTATCTGACGCGGGATAAAGCAGGCGCTAAAGGCGAGGGAAGAGTCTTTGCTTCGCTCGAGGAAGTGTTGCTGGCGCTGGACGCAAAAGAGGTGACGACGCAGACACCGATCAAGCTTCGCATCCAGGGAGACTTGATCGATCTGACGCAGGAGCACGATCCGCAGGACATTCTTCGTGCCGCCGTGCAGGAAGATGTGCGCCGCGTAATCGACACCACGGTCGGTCGAGTCATCTTTAACGATTCGATTCCGCCAGGCCTGCCATTCTTCAATGGCACGCTCAAGAAAAAAGGACTGCAATCGCTTGTCAACTATTCACACATTCGTCTCGGCCACGAGATGACAGTGAAGATGCTTGACGATCTCAAAAACCTCGGCTTCCTTTACGCTACCAAGGCCGGCATCTCCATCGGTATCGACGATCTGGTAACGCCTGATGCCAAGAAGCCTTTGGTTGATAAAGCTGAAAAAGATGTCATCGCGGTTGAACAGCAATATCTTGACGGCGTCATCACCAGCGGTGAGCGTTACAACAAGGTGATCGCCATCTGGTCTGAGGTGACTGACAAAGTTGCCAAGGAAATGTTCAAGGCGATGGACGAACGCGAGAAGTCTTCAGGCGAACTCAATCCAATTCTCGTCATGAGCGATTCCGGAGCGCGCGGCAGTGCGCAGCAGATTCGCCAGTTGGCGGGCATGCGCGGCTTGATGGCCAAGCCCTCGGGCGAAATCATCGAGACGCCGATCAAGGCCAACTTCCGCGAAGGCCTGGACGTGTTGCAGTACTTCATCTCCACGCACGGCGCACGCAAGGGTCTGGCCGATACCGCGCTGAAAACTGCCGACTCGGGTTACCTGACACGCCGTCTCGTTGACGTCGCTCAGGACGTGATCATCAGTGAGCCGGACTGCGGCACGCTGCGCGGCATCTCTGCCAGCGCCATCGTTGAAGGCGGCGAAGAGATCGAGTCGTTGCGCGATCGCATCGTCGGCCGCATCGCGTTGGAAGACGTTATCGATCCGGTCGAAGGACGAATAATCGTCGACGCCAATGCGGAGATTGACGAAGACCTTTCGTCTGAAATTCAGCGTTCCGGCGTGCAGCGCGTGCGTATTCGTTCGGTGTTAACCTGCGAGTCGCGTCGCGGCTGCTGCATCAAGTGCTACGGTCGCAACCTGGCAACGGGCCGGCCGGTAGAAATTGGCGAAGCTGTTGGCGTGATTGCGGCGCAATCGATTGGCGAGCCGGGCACGCAGCTCACCATGCGCACCTTCCACATCGGCGGTACGGCGCGTCTGGAAGAGTCTTCGAAACACGAAGCCCGTCAGGATGGAACGATTAAGTATCTCGACCTGCAAACGGTTAAGAGCCGCAAGGGCGAGCGCATCGCCATGAACCGCAACGGTTCTTTAACGATCATCGACGACCGTGGTCGCGAGGCGGCGCGATATCAGATCGTTTATGGCGCGCACATTCTCGTGGAAGACGGCGCGCGCGTGACGCAGGATCGATTGCTGGCGACGTGGGATCCGTTTACCTTCGCGATCCTGACGGAGGTCGCCGGTCACGTTAAGTATCAGGACTTGAAAGAAGGCGTGACCTTTGACGAAGAAGTCGACGAGGTCACCGGCCAGTCGCGCATGGTCGTGAAAGACTCGCCTGACGAGAAGAAGCAGCCTCGACTGGAAGTGCGCAGCGCCGGCAACAAGGTGCTGAAGACTTACCAGATGCCGGTGCGGGCGAATCTGATGGTGGTCGACGGCGAAAACGTCGAGCCCGGCGACATCATTGCGAAGATTCCGCGCGAAACAACGAAAACCAAGGACATCACCGGTGGTCTGCCGCGCGTCGTCGAGTTGTTTGAAGCGCGCCGCCCGGCGGAAACGGCGGTCATGTCTGAAATCGACGGCACCGTCACGCTGGGACCGATTGCCAAGGGTAAACGCAAGCTGATCATTACCGGCGACGATGGCGAAGAGCGCGAGTATGACATCCCGCGCGGCACGCACATCAACGTGCAGGAAGGTGATCGCGTGCGCGCCGGCGAAGCGTTGATGGATGGTCCGCTCAACCCGCACGACATCCTGCGCGTGTTGGGAATGCAACGCTTGCAGGAATACCTGGTAAACGAGATCCAGGAGGTCTACCGCCTGCAAGGTGTGAATATCAACGATAAGCACATCGAAGTCATCGTGCGGCAGATGTTGCGTTGGGTGAAGATCAAGGAAGTTGGCGACACGGACTTCCTGCTCGAGGAGCAGGTTGATCGTTTCCGCTTCACAGACGAAAACGAACGCGTCAACGCGGAGCACGGCGAGGTGGCACAGGCTGAACCGCTGTTGCTTGGTATCACCAAGGCTTCGCTTTCGACTGACTCGTTCATCTCGGCAGCGTCGTTCCAGGAAACGACCCGCGTGCTTACCGAAGCGGCGATCTCCGGACGCATCGACTACCTGCGCGGTCTGAAGGAAAACGTG
PROTEIN sequence
Length: 1336
MFRFQQEKTQLAPDFEAIRISLASPDKIRQWSHGEVTKPETINYRTFKPERDGLFCARIFGPVADWECLCGKYKRMKHRGVICDKCGVEVTQAKVRRERLGHIDLASPCSHVWFFKGLPSRIGHLLDIPLRELEKVLYFESYIVIDPGDVPGIKERELLSDERYRELVRDYPAQFVAKMGAEAIKELLAMVKVEELSIELRKRMREETSQQKKLKYSKRLKVATSFLKSGNRPEWMILDVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLMELRAPEVIVRNEKRMLQEAVDALFDNGRRGRVLRGVNNRPLKSLSGTLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYNQLEKQGHAATIKQAREMVERQEPVVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLVCTAFNADFDGDQMAVHIPLSPEAQIEAAVLMLSSNNILSPASGQPIAVPSQDIVLGIYYLTRDKAGAKGEGRVFASLEEVLLALDAKEVTTQTPIKLRIQGDLIDLTQEHDPQDILRAAVQEDVRRVIDTTVGRVIFNDSIPPGLPFFNGTLKKKGLQSLVNYSHIRLGHEMTVKMLDDLKNLGFLYATKAGISIGIDDLVTPDAKKPLVDKAEKDVIAVEQQYLDGVITSGERYNKVIAIWSEVTDKVAKEMFKAMDEREKSSGELNPILVMSDSGARGSAQQIRQLAGMRGLMAKPSGEIIETPIKANFREGLDVLQYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIISEPDCGTLRGISASAIVEGGEEIESLRDRIVGRIALEDVIDPVEGRIIVDANAEIDEDLSSEIQRSGVQRVRIRSVLTCESRRGCCIKCYGRNLATGRPVEIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTARLEESSKHEARQDGTIKYLDLQTVKSRKGERIAMNRNGSLTIIDDRGREAARYQIVYGAHILVEDGARVTQDRLLATWDPFTFAILTEVAGHVKYQDLKEGVTFDEEVDEVTGQSRMVVKDSPDEKKQPRLEVRSAGNKVLKTYQMPVRANLMVVDGENVEPGDIIAKIPRETTKTKDITGGLPRVVELFEARRPAETAVMSEIDGTVTLGPIAKGKRKLIITGDDGEEREYDIPRGTHINVQEGDRVRAGEALMDGPLNPHDILRVLGMQRLQEYLVNEIQEVYRLQGVNINDKHIEVIVRQMLRWVKIKEVGDTDFLLEEQVDRFRFTDENERVNAEHGEVAQAEPLLLGITKASLSTDSFISAASFQETTRVLTEAAISGRIDYLRGLKENV