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PLM4_65_b1_redo_sep16_scaffold_97021_2

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(1437..2045)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 186.0
  • Bit_score: 160
  • Evalue 1.60e-36
2'-5' RNA ligase (EC:6.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 196.0
  • Bit_score: 132
  • Evalue 1.20e-28
2'-5' RNA ligase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2B1_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 196.0
  • Bit_score: 132
  • Evalue 4.30e-28

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAAAGAAAGACCTCAGCTAGGCAATGAGCCATGGAGAGTTTTCTGCGCCGTTGAACTACCGGATACAGTGCGCGAAGCTGTACTACGACGCATCGCGCATCTGAAAGAAGCGGTGCCCGATGCAAAAGCAAGTTGGAGCCGGGATGCCAACCTGCATCTCACGCTAAAATTCCTCGGCGAGATACCACAAACTTCGGTTCCGAATGTTTCCACCGCCGCCTTGCGAGCCGTTGCGGGTATTGCGCCGTTTTCAGTTCGTCTTGAAGAAACTGGGGCCTTTCCGAGAGAGGGCCATCCTCGGGTTTTATGGATTGGAATAAATGATTTCTCGGGCGAGCTGGGCAAATTGCACTCGCGCCTCGAGGGCGAATCCAGGAATGCGGGTTTTGCAGGCGATAACCGTCCGTTTCATCCACATCTCACCCTCGCTCGTTTGCGTCAGCCGCGACATGCGCGAACACTCGTCGCTGCGCACAGAGAGTTGGACTTCGATCCTGCGGAAATCGCGGTGTCAGAGTTGTTAGTGATTAGGAGTGAACTGAGCAGTGAGGGATCGAGATATACAGTGATCTCGCGACACCCGCTGAACTCAGCCGACGAAGTTTAG
PROTEIN sequence
Length: 203
MKERPQLGNEPWRVFCAVELPDTVREAVLRRIAHLKEAVPDAKASWSRDANLHLTLKFLGEIPQTSVPNVSTAALRAVAGIAPFSVRLEETGAFPREGHPRVLWIGINDFSGELGKLHSRLEGESRNAGFAGDNRPFHPHLTLARLRQPRHARTLVAAHRELDFDPAEIAVSELLVIRSELSSEGSRYTVISRHPLNSADEV*