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PLM4_65_b1_redo_sep16_scaffold_189029_5

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(1732..3276)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK14_RHOMR similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 366.0
  • Bit_score: 298
  • Evalue 8.90e-78
Sigma-54 interacting regulator {ECO:0000313|EMBL:CDM66572.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 394.0
  • Bit_score: 311
  • Evalue 1.40e-81
sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 366.0
  • Bit_score: 298
  • Evalue 2.50e-78

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
ATGCCTGAGTTGACCCATTCTTATCCAGAAACATCCGAATCTCTTCTCCAAACAAGCCAGCTTCCCATAAGTTCTATCGTTAGGGCACTTTGCCAAGCGGCAAATTCAGGGCCTGATGTGCTCTACGAAGTGATGCTGAAGCTGAGCCTGCTTGTTGAGTCTACGGCGCCGATGTATGGGCTTTCAATTTGGAGTTTGGAGACTGGACAGAGGCCGAGATTGAACTGGGCAGAAGGATTACAAGAGCAAGAACTGGCAACGGCTGAGAAAATTGTCAATGAAACCCTGGCGGCTGACTCAGCATGGCCCAACCTCAACGAAGGAGATTCCTCAGTCTGTTTTATTTTGGCTTCGTCGAGACCCGGATGTGCGGGTGCCGCTTTGTACGGACTGTGCGTTCGTCCTCTGACGCGGCATCAAGCAAGAGACCTTGGAGCCATAATGGACGTTACTCGCTTAGCTCATGCTCATGTTTCGGTTAGGCGAGTTTTTCAGCCGCAGGAGGCTGCTGAGGATAAGATTGGCAAGACAACACTGCCCGGGATGATATTTGATAGCCGGGCGATGAATGAAGTAGCTCGCTCTGTAGTTCGAATCAAGGACTCAAACTCGACAGTCTTGATCACTGGCGAATCGGGTACCGGTAAGGAACTAGTTGCGCACGCCATTCACAGGCTTAGCAGACGCTCCGAGAAAGACTTTGTCCCTTTCAATTGCTCAGCTGCTCCGCCTGAATTAATTGAGAGTATGCTTTTTGGTCATCGGAAGGGAAGTTTCACTGGAGCTCTTCGTGATAACGACGGACTAATTCGTGTCGCTGAAAACGGCACGTTGTTCCTCGATGAGATTGGCGATCTGCCGTTGGCGCTTCAGCCCAAGCTGCTTCGATTCTTACAAGAGGGAGAGATTCACACGCTCGGTGAGCCCGCTCCACGAAAAGTAAACATCCGTGTCATTGCCGCAACTCACAAAGACCTCGAACAGTTAGTTCGCGACAAACTATTTAGAGAAGACCTTTACTACCGCATAGCCACGCTCACGGTGAAAGTTCCTCCTTTGCGGGAGCGGCCGGAAGACATCTCGGCGCTGATCTCCCATTATCTTTCCCACTATGCCAGGCGGAATGATAAGCCAATTGCCGGAATTACATGGGAAGCGATCCGCGCTCTCGAGAGCTACTCCTGGCCGGGTAACGTGCGTGAGCTTGCCGGCGAAATGGAGAGATTGGTTTTATATGCGGAGGAGAATGGTCATATAACGCAGGACCACATCAGCGAACACATCTATCCGCATAATCTCCATCGGGAAAATGCTGAAAAAGGTGCAACTGAAAACCTGGAACTGTTATTGGAAGACTACGAAAGACGAGTGATCACCGAGACTTTGAAACGTAATGATTGCAATGTGGCGCGGACGAGCGAAGCCTTAGGGCTGGGCTCGCGACAAACGCTATACAAAAAGATTAAGCGCTTAGCAATCGACATTACCGACTTCCTTCAGGAAGATACCGAGCCCGGTTTACAGTTTCGCGCAGAACGCAACTAA
PROTEIN sequence
Length: 515
MPELTHSYPETSESLLQTSQLPISSIVRALCQAANSGPDVLYEVMLKLSLLVESTAPMYGLSIWSLETGQRPRLNWAEGLQEQELATAEKIVNETLAADSAWPNLNEGDSSVCFILASSRPGCAGAALYGLCVRPLTRHQARDLGAIMDVTRLAHAHVSVRRVFQPQEAAEDKIGKTTLPGMIFDSRAMNEVARSVVRIKDSNSTVLITGESGTGKELVAHAIHRLSRRSEKDFVPFNCSAAPPELIESMLFGHRKGSFTGALRDNDGLIRVAENGTLFLDEIGDLPLALQPKLLRFLQEGEIHTLGEPAPRKVNIRVIAATHKDLEQLVRDKLFREDLYYRIATLTVKVPPLRERPEDISALISHYLSHYARRNDKPIAGITWEAIRALESYSWPGNVRELAGEMERLVLYAEENGHITQDHISEHIYPHNLHRENAEKGATENLELLLEDYERRVITETLKRNDCNVARTSEALGLGSRQTLYKKIKRLAIDITDFLQEDTEPGLQFRAERN*