ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3544_4

Organism: PLM4_65_b1_sep16_Alphaproteobacteria_Rhodospirillales_68_15

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: comp(2701..3390)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Methylopila sp. M107 RepID=UPI00037CFF1A similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 225.0
  • Bit_score: 322
  • Evalue 2.60e-85
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFI51605.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 228.0
  • Bit_score: 321
  • Evalue 6.10e-85
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 228.0
  • Bit_score: 320
  • Evalue 2.10e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGCCCGATCTCGTCATCGAGCGTGTCGCACCCGAAGAGACCTACAAGGCCAAGGCGTACCTGGCCTTGAAGCAGGCGATCACGAACATGGACATCTACAGCTCGCCCGAGCCGTCCTGGCTCGACGAGCGCCAGCTGTCCGAGCGCCTGGGCGTCAGCCGCACGCCGGTGCGCGAAGCCCTCGCCATGCTCGAGCAGGAAGGCTTCGTGAAGTCGCTGCCCCGGCGCGGCATCATCGTCGTCAAGAAGACCAAGCGCGAGATCGTCGAAATGGTGCAGGCCTGGGCCGCGCTCGAGAGCATGGCCGCGCGTCTCATCACGCTCGACGCCACCGGTGACGCGATCGCGACCTTGCGCCCGCTGTTCGAGGGCTTCGACGAGCAGCACACGCCGCACGATCACCTCGGCGAATACTCCTCGGCCAATCTCGCCTTCCACCAGGCGATCATCCGCCTTTCCGGGGCCAAGCTCCTCGCCGACGTGACCGACAATCTGCTGCTGCACGTCCGCGGCATCCGCCAGATCACGATCGGACGCGACAATCGCGCCGAACGCTCCATCCGCGACCATCTCGGCATCATCGACGCGCTCGAGCGGCGCGACACCGAGGCGGCCGAGCGGCTTTCGCGCGAGCATACGCTCGGGCTCGCCGCCTATGTCGAGCAATACGGCGACCGGTTCTTCGATTGA
PROTEIN sequence
Length: 230
VPDLVIERVAPEETYKAKAYLALKQAITNMDIYSSPEPSWLDERQLSERLGVSRTPVREALAMLEQEGFVKSLPRRGIIVVKKTKREIVEMVQAWAALESMAARLITLDATGDAIATLRPLFEGFDEQHTPHDHLGEYSSANLAFHQAIIRLSGAKLLADVTDNLLLHVRGIRQITIGRDNRAERSIRDHLGIIDALERRDTEAAERLSREHTLGLAAYVEQYGDRFFD*