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PLM4_65_b1_sep16_Alphaproteobacteria_Rhodospirillales_68_15

PLM4_65cm_b1_redo_sep2016_Alphaproteobacteria_68_15
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 301-350 of 472 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_60233
Phylum: Proteobacteria (66.67%)
6 5641 bp 69.37 15.00 92.86
PLM4_65_b1_redo_sep16_scaffold_41313
Class: Betaproteobacteria (66.67%)
6 5116 bp 65.66 7.33 93.00
PLM4_65_b1_redo_sep16_scaffold_26133
Phylum: Proteobacteria (100%)
6 5845 bp 69.53 13.29 91.67
PLM4_65_b1_redo_sep16_scaffold_50495
Order: Rhodospirillales (83.33%)
6 4043 bp 69.82 14.77 92.16
PLM4_65_b1_redo_sep16_scaffold_31761
Order: Rhodospirillales (66.67%)
6 5514 bp 69.06 16.40 90.53
PLM4_65_b1_redo_sep16_scaffold_21675
Class: Betaproteobacteria (50%)
6 6474 bp 69.32 14.67 99.58
PLM4_65_b1_redo_sep16_scaffold_38269
Order: Rhizobiales (50%)
6 4740 bp 68.59 13.99 82.91
PLM4_65_b1_redo_sep16_scaffold_71016
Class: Alphaproteobacteria (50%)
6 5918 bp 69.01 13.33 90.94
PLM4_65_b1_redo_sep16_scaffold_98411
Phylum: Proteobacteria (50%)
6 4694 bp 67.28 12.53 81.42
PLM4_65_b1_redo_sep16_scaffold_21951
Phylum: Proteobacteria (83.33%)
6 6434 bp 67.24 13.41 90.08
PLM4_65_b1_redo_sep16_scaffold_73589
Domain: Bacteria (50%)
6 3243 bp 67.10 15.03 77.83
PLM4_65_b1_redo_sep16_scaffold_11629
Order: Rhodospirillales (66.67%)
6 9069 bp 67.68 16.54 96.03
PLM4_65_b1_redo_sep16_scaffold_22582
Order: Rhodospirillales (66.67%)
6 6337 bp 69.18 15.22 92.27
PLM4_65_b1_redo_sep16_scaffold_31282
Class: Alphaproteobacteria (50%)
6 5297 bp 68.23 13.42 87.84
PLM4_65_b1_redo_sep16_scaffold_40067
Class: Betaproteobacteria (83.33%)
6 8209 bp 69.95 15.92 91.03
PLM4_65_b1_redo_sep16_scaffold_35784
Order: Rhodospirillales (50%)
6 4923 bp 68.86 12.16 88.91
PLM4_65_b1_redo_sep16_scaffold_47788
Class: Betaproteobacteria (50%)
6 4174 bp 69.31 15.52 73.67
PLM4_65_b1_redo_sep16_scaffold_30199
Class: Alphaproteobacteria (66.67%)
6 6047 bp 68.08 13.05 75.56
PLM4_65_b1_redo_sep16_scaffold_42140
Order: Rhodospirillales (66.67%)
6 4487 bp 64.68 15.08 91.60
PLM4_65_b1_redo_sep16_scaffold_209341
Class: Alphaproteobacteria (50%)
6 4123 bp 69.39 13.21 93.06
PLM4_65_b1_redo_sep16_scaffold_37804
Phylum: Proteobacteria (83.33%)
6 6661 bp 67.80 13.56 85.30
PLM4_65_b1_redo_sep16_scaffold_29606
Phylum: Proteobacteria (66.67%)
6 5462 bp 69.81 14.03 94.25
PLM4_65_b1_redo_sep16_scaffold_23832
Order: Rhodospirillales (50%)
6 6145 bp 68.64 7.23 88.58
PLM4_65_b1_redo_sep16_scaffold_26004
Order: Rhodospirillales (100%)
6 5861 bp 67.46 14.46 92.90
PLM4_65_b1_redo_sep16_scaffold_180175
Domain: Bacteria (50%)
6 2767 bp 64.62 10.79 85.44
PLM4_65_b1_redo_sep16_scaffold_14466
Class: Alphaproteobacteria (50%)
6 8254 bp 64.47 13.54 82.14
PLM4_65_b1_redo_sep16_scaffold_50369
Domain: Bacteria (66.67%)
6 4049 bp 68.12 13.89 83.80
PLM4_65_b1_redo_sep16_scaffold_27591
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (66.67%)
6 5668 bp 69.76 14.42 94.32
PLM4_65_b1_redo_sep16_scaffold_73987
Class: Alphaproteobacteria (50%)
6 3233 bp 67.52 13.69 86.95
PLM4_65_b1_redo_sep16_scaffold_17653
Class: Alphaproteobacteria (50%)
6 7252 bp 68.06 13.82 85.84
PLM4_65_b1_redo_sep16_scaffold_102159
Class: Alphaproteobacteria (80%)
5 3014 bp 68.45 13.89 88.19
PLM4_65_b1_redo_sep16_scaffold_38187
Class: Alphaproteobacteria (60%)
5 4745 bp 67.31 13.53 86.55
PLM4_65_b1_redo_sep16_scaffold_25644
Species: Skermanella aerolata (60%)
5 5902 bp 67.77 14.94 89.21
PLM4_65_b1_redo_sep16_scaffold_53268
Domain: Bacteria (80%)
5 3917 bp 69.21 15.24 91.68
PLM4_65_b1_redo_sep16_scaffold_83224 5 3375 bp 67.32 12.98 86.76
PLM4_65_b1_redo_sep16_scaffold_48204
Phylum: Proteobacteria (60%)
5 4153 bp 69.23 14.95 95.06
PLM4_65_b1_redo_sep16_scaffold_21357
Class: Betaproteobacteria (60%)
5 6526 bp 67.02 12.94 86.79
PLM4_65_b1_redo_sep16_scaffold_56301
Phylum: Proteobacteria (80%)
5 3791 bp 66.79 12.07 96.78
PLM4_65_b1_redo_sep16_scaffold_42507
Order: Rhizobiales (80%)
5 4465 bp 64.21 6.92 78.81
PLM4_65_b1_redo_sep16_scaffold_52776
Domain: Bacteria (60%)
5 3941 bp 67.95 15.91 89.22
PLM4_65_b1_redo_sep16_scaffold_56833
Phylum: Proteobacteria (80%)
5 3772 bp 68.45 16.58 95.36
PLM4_65_b1_redo_sep16_scaffold_22514
Domain: Bacteria (60%)
5 6348 bp 65.96 13.99 88.75
PLM4_65_b1_redo_sep16_scaffold_62702 5 3561 bp 68.46 15.29 65.54
PLM4_65_b1_redo_sep16_scaffold_50985
Species: RLO_Betaproteobacteria_65_14 (60%)
5 4021 bp 67.84 13.02 94.60
PLM4_65_b1_redo_sep16_scaffold_40008
Order: Rhodospirillales (60%)
5 4622 bp 68.30 16.91 85.55
PLM4_65_b1_redo_sep16_scaffold_18290
Phylum: Proteobacteria (60%)
5 7115 bp 65.19 12.19 90.32
PLM4_65_b1_redo_sep16_scaffold_84773
Domain: Bacteria (60%)
5 2983 bp 69.59 15.84 92.62
PLM4_65_b1_redo_sep16_scaffold_129830
Phylum: Proteobacteria (80%)
5 3915 bp 67.71 13.41 96.32
PLM4_65_b1_redo_sep16_scaffold_148575
Phylum: Proteobacteria (60%)
5 2503 bp 67.88 12.58 89.17
PLM4_65_b1_redo_sep16_scaffold_31256
Domain: Bacteria (100%)
5 5299 bp 68.50 14.07 80.62
Displaying items 301-350 of 472 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.