ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_6874_1

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 1..732

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase bin=GWA1_Deltaproteobacteria_52_35 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 232.0
  • Bit_score: 173
  • Evalue 1.60e-40
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 235.0
  • Bit_score: 152
  • Evalue 1.10e-34
Tax=GWA1_Bdellovibrionales_52_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 232.0
  • Bit_score: 173
  • Evalue 2.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_Bdellovibrionales_52_35_curated → Bdellovibrionaceae → Bdellovibrionales → Bdellovibrio → Bacteria

Sequences

DNA sequence
Length: 732
AAGGCGCTCGCGCTCGACAAGCCGTTCACGCTCACCCCCGCCCGGATCCTGTTCGACGACGGGATCGTGCTCGCGGTCGACAAGCCGGCCGGGCTGCCCACGCACGCGACGGCTGATCGCTCGCGCCCGAGCCTCGCGGGGCACGTCCTTGCCTGGCTCCGCGCTCGGGGCACGCCCGCCACACCCGCACTGCACCAGCGCCTCGACCGCGACACCACCGGCGTCGTGATCTTCGGCATCGACGCGCGCGCCAACGCGGGCCTGGCGCAGGCGTTCGCCGGTCGCCAGGCCGAAAAAGGCTACCTCGCGCTCACCGCGTCGCCCGCGCGGCGCCCCCCGCGCCACTTCCGCATCGAGGCTCCGGTCGCGGGGAGGCCCGCGTTGACGGAGGTCGCCGTGCGCGAGGTGCTCCAGGGCGCGCTGCTCGTCGAGGCGCGTCTCTACACCGGACGCCGCCACCAGCTGCGCGTGCACCTCGCCCACGTGGGTCTGCCGGTTCTCGGCGACGGCCTCTACGGCGGGACCGACCCGAGGGCCCCGCGGCTGATGCTGCACGCCTTTCGCCTGGCGCTGCCGCACCCGGTCACCGGCGAGCGCCTGGTGATCGAAAGCCGGATCCCCGCGGACTTCGCGGCTGTGCTCGCCAGGCTTCGCCGCGAGGACGAAGGCGGAACGAAGCGAGACGGAAAGAGACGAGACGGAAAGAAACGAAGCCGGGACGCTCTGGACTGA
PROTEIN sequence
Length: 244
KALALDKPFTLTPARILFDDGIVLAVDKPAGLPTHATADRSRPSLAGHVLAWLRARGTPATPALHQRLDRDTTGVVIFGIDARANAGLAQAFAGRQAEKGYLALTASPARRPPRHFRIEAPVAGRPALTEVAVREVLQGALLVEARLYTGRRHQLRVHLAHVGLPVLGDGLYGGTDPRAPRLMLHAFRLALPHPVTGERLVIESRIPADFAAVLARLRREDEGGTKRDGKRRDGKKRSRDALD*